RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 Q6YL49 198 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 SPATA12Q7Z6I5 190 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 RHPN1-AS1Q9BWJ2 59 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 IGHV4-4A0A075B6R2 117 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 CRLF1O75462 422 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 C20orf173Q96LM9 149 aa12.8□□□□□ -0.36
GAPDH-201ENST00000229239 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
GAPDH-201ENST00000229239 ID1P41134 155 aa12.79□□□□□ -0.36
GAPDH-201ENST00000229239 CSN3P07498 182 aa12.78□□□□□ -0.36
GAPDH-201ENST00000229239 ELANEP08246 267 aa12.78□□□□□ -0.36
GAPDH-201ENST00000229239 TEX29Q8N6K0 151 aa12.78□□□□□ -0.36
GAPDH-201ENST00000229239 TRAV21A0A0B4J279 112 aa12.78□□□□□ -0.36
GAPDH-201ENST00000229239 SNAI2O43623 268 aa12.78□□□□□ -0.36
GAPDH-201ENST00000229239 SIGLEC8Q9NYZ4 499 aa12.78□□□□□ -0.36
GAPDH-201ENST00000229239 TCF21O43680 179 aa12.77□□□□□ -0.37
GAPDH-201ENST00000229239 APRG1Q8IVJ8 170 aa12.77□□□□□ -0.37
GAPDH-201ENST00000229239 SNHG12Q9BXW3 62 aa12.77□□□□□ -0.37
GAPDH-201ENST00000229239 ST20Q9HBF5 79 aa12.77□□□□□ -0.37
GAPDH-201ENST00000229239 OR4C46A6NHA9 309 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 HSBP1L1C9JCN9 74 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 MED14OSP0DP75 135 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 RPL11P62913 178 aaKnown RBP12.76□□□□□ -0.37
GAPDH-201ENST00000229239 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 FAM19A4Q96LR4 140 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 MAP1LC3AQ9H492 121 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 C11orf21Q9P2W6 132 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 LINC01546A6NGU7 62 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 IFI27P40305 119 aaPredicted RBP12.76□□□□□ -0.37
GAPDH-201ENST00000229239 TMEM95Q3KNT9 176 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 LCNL1Q6ZST4 164 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 OR8A1Q8NGG7 326 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 ZNF747Q9BV97 191 aa12.76□□□□□ -0.37
GAPDH-201ENST00000229239 NXT2Q9NPJ8 142 aaKnown RBP12.76□□□□□ -0.37
GAPDH-201ENST00000229239 ZMAT5Q9UDW3 170 aaKnown RBP12.76□□□□□ -0.37
GAPDH-201ENST00000229239 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
GAPDH-201ENST00000229239 ZFAND2AQ8N6M9 145 aa12.75□□□□□ -0.37
GAPDH-201ENST00000229239 MYOZ3Q8TDC0 251 aa12.75□□□□□ -0.37
GAPDH-201ENST00000229239 TMEM160Q9NX00 188 aa12.75□□□□□ -0.37
GAPDH-201ENST00000229239 MUC21A0A0G2JKD1 596 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 MUC21A0A140T8X8 626 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 LINC01545Q5VT33 79 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 PRIMA1Q86XR5 153 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 DEFB125Q8N687 156 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 LGALS9O00182 355 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 HBDP02042 147 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 SSTP61278 116 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 RNF152Q8N8N0 203 aa12.74□□□□□ -0.37
GAPDH-201ENST00000229239 MRPS16Q9Y3D3 137 aaKnown RBP12.74□□□□□ -0.37
GAPDH-201ENST00000229239 EREGO14944 169 aa12.73□□□□□ -0.37
GAPDH-201ENST00000229239 LGALS1P09382 135 aaKnown RBP12.73□□□□□ -0.37
GAPDH-201ENST00000229239 HNRNPA3P51991 378 aaKnown RBP12.73□□□□□ -0.37
GAPDH-201ENST00000229239 ZNF702PQ9H963 129 aa12.73□□□□□ -0.37
GAPDH-201ENST00000229239 MSRB1Q9NZV6 116 aa12.73□□□□□ -0.37
GAPDH-201ENST00000229239 PRSS47A8MTI9 375 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 NPYP01303 97 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 SPANXN1Q5VSR9 72 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 Q6ZN92 141 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 LINC00173Q6ZV60 143 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 UBE2E2Q96LR5 201 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 ATRQ13535 2644 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 DNHD1Q96M86 4753 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 LOC389332A0A1B0GUA5 103 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 IGLL1P15814 213 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 NUTF2P61970 127 aaKnown RBP12.72□□□□□ -0.37
GAPDH-201ENST00000229239 ATOH7Q8N100 152 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
GAPDH-201ENST00000229239 A0A1B0GV90 55 aa12.71□□□□□ -0.37
GAPDH-201ENST00000229239 PSMG4Q5JS54 123 aa12.71□□□□□ -0.37
GAPDH-201ENST00000229239 PRR9Q5T870 116 aa12.71□□□□□ -0.37
GAPDH-201ENST00000229239 Q8N2B8 174 aa12.71□□□□□ -0.37
GAPDH-201ENST00000229239 DCANP1Q8TF63 244 aa12.71□□□□□ -0.37
GAPDH-201ENST00000229239 MRAP2Q96G30 205 aa12.71□□□□□ -0.37
GAPDH-201ENST00000229239 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
GAPDH-201ENST00000229239 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
GAPDH-201ENST00000229239 ASIPP42127 132 aa12.7□□□□□ -0.38
GAPDH-201ENST00000229239 DPF1Q92782 380 aa12.7□□□□□ -0.38
GAPDH-201ENST00000229239 A0A096LNJ9 63 aa12.7□□□□□ -0.38
GAPDH-201ENST00000229239 HOXA3O43365 443 aaPredicted RBP12.7□□□□□ -0.38
GAPDH-201ENST00000229239 FBN1P35555 2871 aaKnown RBP12.69□□□□□ -0.38
GAPDH-201ENST00000229239 TSPOP30536 169 aa12.69□□□□□ -0.38
GAPDH-201ENST00000229239 SNRPD3P62318 126 aaKnown RBP12.69□□□□□ -0.38
GAPDH-201ENST00000229239 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
GAPDH-201ENST00000229239 LGALS9CQ6DKI2 356 aa12.69□□□□□ -0.38
GAPDH-201ENST00000229239 TMEM86BQ8N661 226 aa12.69□□□□□ -0.38
GAPDH-201ENST00000229239 CUBNO60494 3623 aa12.69□□□□□ -0.38
GAPDH-201ENST00000229239 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 NCR2O95944 276 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 S100A4P26447 101 aaKnown RBP12.68□□□□□ -0.38
GAPDH-201ENST00000229239 Q8N8P6 123 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 MXRA5Q9NR99 2828 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 KLLNB2CW77 178 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 FCER1GP30273 86 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 COL5A1-AS1Q5SY13 56 aa12.68□□□□□ -0.38
GAPDH-201ENST00000229239 C10orf99Q6UWK7 81 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms