RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 RPL11P62913 178 aaKnown RBP14.4□□□□□ -0.1
YBX3-201ENST00000228251 UBE2E2Q96LR5 201 aa14.4□□□□□ -0.1
YBX3-201ENST00000228251 LAMTOR2Q9Y2Q5 125 aa14.4□□□□□ -0.1
YBX3-201ENST00000228251 NBPF19A0A087WUL8 3843 aa14.4□□□□□ -0.1
YBX3-201ENST00000228251 TRAV21A0A0B4J279 112 aa14.39□□□□□ -0.11
YBX3-201ENST00000228251 ZNF705AQ6ZN79 300 aaPredicted RBP14.39□□□□□ -0.11
YBX3-201ENST00000228251 LOC389332A0A1B0GUA5 103 aa14.39□□□□□ -0.11
YBX3-201ENST00000228251 J3QKU1 62 aa14.39□□□□□ -0.11
YBX3-201ENST00000228251 TCF21O43680 179 aa14.39□□□□□ -0.11
YBX3-201ENST00000228251 CACNG7P62955 275 aa14.39□□□□□ -0.11
YBX3-201ENST00000228251 LINC01545Q5VT33 79 aa14.39□□□□□ -0.11
YBX3-201ENST00000228251 MAP1LC3CQ9BXW4 147 aa14.39□□□□□ -0.11
YBX3-201ENST00000228251 IGKV3-7A0A075B6H7 116 aa14.38□□□□□ -0.11
YBX3-201ENST00000228251 OR4C46A6NHA9 309 aa14.38□□□□□ -0.11
YBX3-201ENST00000228251 M0R143 59 aa14.38□□□□□ -0.11
YBX3-201ENST00000228251 IGLL1P15814 213 aa14.38□□□□□ -0.11
YBX3-201ENST00000228251 SRD5A1P18405 259 aa14.38□□□□□ -0.11
YBX3-201ENST00000228251 UQCR10Q9UDW1 63 aa14.38□□□□□ -0.11
YBX3-201ENST00000228251 SELENOKQ9Y6D0 94 aa14.38□□□□□ -0.11
YBX3-201ENST00000228251 IGHV4OR15-8A0A075B7B6 117 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 A0A087WW49 117 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 KLLNB2CW77 178 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 EVI2AP22794 236 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 KIR3DS1Q14943 382 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 DEFB125Q8N687 156 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 KLHDC1Q8N7A1 406 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 SCRT2Q9NQ03 307 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 A0A1B0GV90 55 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 MED14OSP0DP75 135 aa14.37□□□□□ -0.11
YBX3-201ENST00000228251 H3BVH4 76 aa14.36□□□□□ -0.11
YBX3-201ENST00000228251 TNFRSF6BO95407 300 aa14.36□□□□□ -0.11
YBX3-201ENST00000228251 ID1P41134 155 aa14.36□□□□□ -0.11
YBX3-201ENST00000228251 MS4A6AQ9H2W1 248 aa14.36□□□□□ -0.11
YBX3-201ENST00000228251 PRSS47A8MTI9 375 aa14.35□□□□□ -0.11
YBX3-201ENST00000228251 PDZD2O15018 2839 aa14.35□□□□□ -0.11
YBX3-201ENST00000228251 IGLV2-18A0A075B6J9 118 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 K7EQG2 157 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 ANXA2RQ3ZCQ2 193 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 NRACQ8N912 160 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 MAP1LC3AQ9H492 121 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 J3KRW8 73 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 HBDP02042 147 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 GATA1P15976 413 aaPredicted RBP14.34□□□□□ -0.11
YBX3-201ENST00000228251 HOXD3P31249 432 aaPredicted RBP14.34□□□□□ -0.11
YBX3-201ENST00000228251 SYNJ2BPP57105 145 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 WFDC11Q8NEX6 87 aa14.34□□□□□ -0.11
YBX3-201ENST00000228251 RNASE4P34096 147 aaKnown RBP14.33□□□□□ -0.12
YBX3-201ENST00000228251 ADAMTSL5Q6ZMM2 481 aa14.33□□□□□ -0.12
YBX3-201ENST00000228251 ODF3Q96PU9 254 aa14.33□□□□□ -0.12
YBX3-201ENST00000228251 TMEM86BQ8N661 226 aa14.32□□□□□ -0.12
YBX3-201ENST00000228251 ST20Q9HBF5 79 aa14.32□□□□□ -0.12
YBX3-201ENST00000228251 MUC4Q99102 2169 aa14.32□□□□□ -0.12
YBX3-201ENST00000228251 NXPH4O95158 308 aa14.32□□□□□ -0.12
YBX3-201ENST00000228251 RNASE3P12724 160 aaKnown RBP14.32□□□□□ -0.12
YBX3-201ENST00000228251 SPANXN1Q5VSR9 72 aa14.32□□□□□ -0.12
YBX3-201ENST00000228251 MCRIP2Q9BUT9 160 aaKnown RBP14.32□□□□□ -0.12
YBX3-201ENST00000228251 NXT2Q9NPJ8 142 aaKnown RBP14.32□□□□□ -0.12
YBX3-201ENST00000228251 AKAP9Q99996 3911 aa14.31□□□□□ -0.12
YBX3-201ENST00000228251 ASIPP42127 132 aa14.31□□□□□ -0.12
YBX3-201ENST00000228251 WFDC3Q8IUB2 231 aa14.31□□□□□ -0.12
YBX3-201ENST00000228251 OR2K2Q8NGT1 345 aa14.31□□□□□ -0.12
YBX3-201ENST00000228251 A0A0J9YX75 114 aa14.3□□□□□ -0.12
YBX3-201ENST00000228251 hDV102S1A0JD36 115 aa14.3□□□□□ -0.12
YBX3-201ENST00000228251 HIST2H2BCQ6DN03 193 aa14.3□□□□□ -0.12
YBX3-201ENST00000228251 C18orf65Q6ZTR6 163 aa14.3□□□□□ -0.12
YBX3-201ENST00000228251 SMIM15Q7Z3B0 74 aa14.3□□□□□ -0.12
YBX3-201ENST00000228251 Q8N8P6 123 aa14.3□□□□□ -0.12
YBX3-201ENST00000228251 DUX5Q96PT3 197 aa14.3□□□□□ -0.12
YBX3-201ENST00000228251 TSPOP30536 169 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 NUTF2P61970 127 aaKnown RBP14.29□□□□□ -0.12
YBX3-201ENST00000228251 TCTEX1D4Q5JR98 221 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 Q6ZN92 141 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 TLN2Q9Y4G6 2542 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 GNRH2O43555 120 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 ZNF688P0C7X2 276 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 FXYD7P58549 80 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 MRAP2Q96G30 205 aa14.29□□□□□ -0.12
YBX3-201ENST00000228251 MRPS16Q9Y3D3 137 aaKnown RBP14.29□□□□□ -0.12
YBX3-201ENST00000228251 TIMM8BQ9Y5J9 83 aaPredicted RBP14.29□□□□□ -0.12
YBX3-201ENST00000228251 FLNAP21333 2647 aaKnown RBP14.28□□□□□ -0.12
YBX3-201ENST00000228251 KRTAP1-1Q07627 177 aa14.28□□□□□ -0.12
YBX3-201ENST00000228251 LGALS9BQ3B8N2 356 aa14.28□□□□□ -0.12
YBX3-201ENST00000228251 PSMG4Q5JS54 123 aa14.28□□□□□ -0.12
YBX3-201ENST00000228251 LGALS9CQ6DKI2 356 aa14.28□□□□□ -0.12
YBX3-201ENST00000228251 MYO9AB2RTY4 2548 aa14.28□□□□□ -0.12
YBX3-201ENST00000228251 TRAV26-2A0A0B4J265 109 aa14.27□□□□□ -0.12
YBX3-201ENST00000228251 FCER1GP30273 86 aa14.27□□□□□ -0.12
YBX3-201ENST00000228251 HNRNPA3P51991 378 aaKnown RBP14.27□□□□□ -0.12
YBX3-201ENST00000228251 TEX29Q8N6K0 151 aa14.27□□□□□ -0.12
YBX3-201ENST00000228251 PMCHL2Q9BQD1 86 aa14.27□□□□□ -0.12
YBX3-201ENST00000228251 ANK3Q12955 4377 aaKnown RBP14.27□□□□□ -0.13
YBX3-201ENST00000228251 SPRY2O43597 315 aa14.27□□□□□ -0.13
YBX3-201ENST00000228251 TFPI2P48307 235 aa14.27□□□□□ -0.13
YBX3-201ENST00000228251 SNRPD3P62318 126 aaKnown RBP14.27□□□□□ -0.13
YBX3-201ENST00000228251 POM121L12Q8N7R1 296 aa14.27□□□□□ -0.13
YBX3-201ENST00000228251 IFI27L1Q96BM0 104 aa14.26□□□□□ -0.13
YBX3-201ENST00000228251 AGRNO00468 2067 aa14.26□□□□□ -0.13
YBX3-201ENST00000228251 C7orf71A4D174 169 aa14.25□□□□□ -0.13
YBX3-201ENST00000228251 H0Y8G0 127 aa14.25□□□□□ -0.13
YBX3-201ENST00000228251 S100A4P26447 101 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms