RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 Q8N8P6 123 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 CFHR4Q92496 578 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 NCOR2Q9Y618 2525 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 SCGB1D4Q6XE38 83 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 IL17RELQ6ZVW7 336 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 DYNAPQ8N1N2 210 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 C11orf21Q9P2W6 132 aa10.86□□□□□ -0.67
SF1-201ENST00000227503 TIMM23O14925 209 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 IGHG4P01861 327 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 PRTN3P24158 256 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 SRSF9Q13242 221 aaKnown RBP eCLIP10.85□□□□□ -0.67
SF1-201ENST00000227503 LAGE3Q14657 143 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 C5orf64Q2M2E5 130 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 TMEM78Q5T7P6 136 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 SHISA2Q6UWI4 295 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 TCL1BO95988 128 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 TAL2Q16559 108 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 LYPD1Q8N2G4 141 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 LINC01560Q8TB33 94 aa10.85□□□□□ -0.67
SF1-201ENST00000227503 AJUBAQ96IF1 538 aa10.84□□□□□ -0.67
SF1-201ENST00000227503 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
SF1-201ENST00000227503 J3KRW8 73 aa10.84□□□□□ -0.67
SF1-201ENST00000227503 LY6G5BQ8NDX9 201 aa10.84□□□□□ -0.67
SF1-201ENST00000227503 PRADC1Q9BSG0 188 aa10.84□□□□□ -0.67
SF1-201ENST00000227503 RAXQ9Y2V3 346 aa10.84□□□□□ -0.67
SF1-201ENST00000227503 SLC25A16P16260 332 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 NRACQ8N912 160 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 ONECUT1Q9UBC0 465 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 IGKV3D-20A0A0C4DH25 116 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 ZNF672Q499Z4 452 aaPredicted RBP10.83□□□□□ -0.68
SF1-201ENST00000227503 ANKRD29Q8N6D5 301 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 TMEM190Q8WZ59 177 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 SMAD5-AS1Q9Y6J3 95 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 LINC01546A6NGU7 62 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 PSMG3-AS1Q96PY0 264 aa10.83□□□□□ -0.68
SF1-201ENST00000227503 NBR2O15453 112 aa10.82□□□□□ -0.68
SF1-201ENST00000227503 NHLRC4P0CG21 123 aaPredicted RBP10.82□□□□□ -0.68
SF1-201ENST00000227503 PPDPFLQ8WWR9 84 aa10.82□□□□□ -0.68
SF1-201ENST00000227503 SPTBN1Q01082 2364 aaKnown RBP10.82□□□□□ -0.68
SF1-201ENST00000227503 IGHV3-49A0A0A0MS15 119 aa10.82□□□□□ -0.68
SF1-201ENST00000227503 F8VRH5 84 aa10.82□□□□□ -0.68
SF1-201ENST00000227503 FABP5P3A8MUU1 101 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 CCDC179H3BU77 68 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 GRNP28799 593 aaKnown RBP10.81□□□□□ -0.68
SF1-201ENST00000227503 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
SF1-201ENST00000227503 TEN1Q86WV5 123 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 NPBQ8NG41 125 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 OR11H6Q8NGC7 330 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 PTPRQQ9UMZ3 2332 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 H7C2G1 150 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 CRLF1O75462 422 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 PLNP26678 52 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 ZFAND6Q6FIF0 208 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 DPM3Q9P2X0 92 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 COL6A6A6NMZ7 2263 aa10.81□□□□□ -0.68
SF1-201ENST00000227503 H7C1H1 209 aa10.8□□□□□ -0.68
SF1-201ENST00000227503 GAGE5Q13069 117 aa10.8□□□□□ -0.68
SF1-201ENST00000227503 GAGE6Q13070 117 aa10.8□□□□□ -0.68
SF1-201ENST00000227503 TEX29Q8N6K0 151 aa10.8□□□□□ -0.68
SF1-201ENST00000227503 Q6ZS46 218 aa10.8□□□□□ -0.68
SF1-201ENST00000227503 ATP6V0E2Q8NHE4 81 aa10.8□□□□□ -0.68
SF1-201ENST00000227503 LY6HO94772 140 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 HERV-K104P63124 156 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 SMIM20Q8N5G0 67 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
SF1-201ENST00000227503 FANCD2OSQ96PS1 177 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 F8W735 103 aaPredicted RBP10.79□□□□□ -0.68
SF1-201ENST00000227503 ZNF688P0C7X2 276 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 SCGB1C2P0DMR2 95 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 PDE6HQ13956 83 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
SF1-201ENST00000227503 C3orf56Q8N813 242 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 RASL10AQ92737 203 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 RAX2Q96IS3 184 aa10.79□□□□□ -0.68
SF1-201ENST00000227503 IGLV11-55A0A075B6I3 123 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 UBE2D1P51668 147 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 PSMG4Q5JS54 123 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 ODF3BA8MYP8 253 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 UBE2D3P61077 147 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 UBE2D2P62837 147 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 FBXL19-AS1Q494R0 122 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 SPANXN1Q5VSR9 72 aa10.78□□□□□ -0.68
SF1-201ENST00000227503 A8MWV9 139 aa10.77□□□□□ -0.69
SF1-201ENST00000227503 K7ENP7 123 aa10.77□□□□□ -0.69
SF1-201ENST00000227503 NBL1P41271 181 aa10.77□□□□□ -0.69
SF1-201ENST00000227503 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
SF1-201ENST00000227503 TRAV8-2A0A0B4J237 113 aa10.77□□□□□ -0.69
SF1-201ENST00000227503 CD7P09564 240 aa10.77□□□□□ -0.69
SF1-201ENST00000227503 NDUFA11Q86Y39 141 aa10.77□□□□□ -0.69
SF1-201ENST00000227503 NDPQ00604 133 aa10.76□□□□□ -0.69
SF1-201ENST00000227503 HES1Q14469 280 aa10.76□□□□□ -0.69
SF1-201ENST00000227503 C9JAW5 83 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms