RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 Q8N9W7 124 aa14.44□□□□□ -0.1
CLIP2-201ENST00000223398 Q8N7P7 452 aa14.44□□□□□ -0.1
CLIP2-201ENST00000223398 NDUFAF3Q9BU61 184 aa14.44□□□□□ -0.1
CLIP2-201ENST00000223398 Q8N8P6 123 aa14.44□□□□□ -0.1
CLIP2-201ENST00000223398 Q8NFD4 153 aa14.43□□□□□ -0.1
CLIP2-201ENST00000223398 KRTAP27-1Q3LI81 207 aa14.43□□□□□ -0.1
CLIP2-201ENST00000223398 RMI2Q96E14 147 aa14.43□□□□□ -0.1
CLIP2-201ENST00000223398 SONP18583 2426 aaKnown RBP14.42□□□□□ -0.1
CLIP2-201ENST00000223398 SPAG8Q99932 426 aaPredicted RBP14.42□□□□□ -0.1
CLIP2-201ENST00000223398 PRSS29PA6NIE9 313 aa14.42□□□□□ -0.1
CLIP2-201ENST00000223398 TRAV8-3A0A0A6YYJ7 113 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 CT83Q5H943 113 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 PRR20EP86478 221 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 PRR20CP86479 221 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 PRR20DP86480 221 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 PRR20BP86481 221 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 PRR20AP86496 221 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 CFHR4Q92496 578 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 CITED2Q99967 270 aaPredicted RBP14.41□□□□□ -0.1
CLIP2-201ENST00000223398 FAM231BA6NCW3 169 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 RHOHQ15669 191 aa14.41□□□□□ -0.1
CLIP2-201ENST00000223398 TRAV8-4A0A0B4J246 113 aa14.4□□□□□ -0.1
CLIP2-201ENST00000223398 LOC105371267A0A1B0GV96 52 aa14.4□□□□□ -0.1
CLIP2-201ENST00000223398 C18orf32Q8TCD1 76 aa14.4□□□□□ -0.1
CLIP2-201ENST00000223398 TMEM141Q96I45 108 aa14.4□□□□□ -0.1
CLIP2-201ENST00000223398 K7EIM0 57 aa14.4□□□□□ -0.1
CLIP2-201ENST00000223398 DEFB4AO15263 64 aa14.4□□□□□ -0.1
CLIP2-201ENST00000223398 V9GYV3 84 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 XCL1P47992 114 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 WIPF2Q8TF74 440 aaPredicted RBP14.39□□□□□ -0.11
CLIP2-201ENST00000223398 I3L2K1 104 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 SLAQ13239 276 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 WFDC11Q8NEX6 87 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 NPYP01303 97 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 PYGO2Q9BRQ0 406 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 IGLV11-55A0A075B6I3 123 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 FBXL19-AS1Q494R0 122 aa14.39□□□□□ -0.11
CLIP2-201ENST00000223398 H3BMM0 161 aa14.38□□□□□ -0.11
CLIP2-201ENST00000223398 CTSGP08311 255 aa14.38□□□□□ -0.11
CLIP2-201ENST00000223398 UBE2WQ96B02 151 aa14.38□□□□□ -0.11
CLIP2-201ENST00000223398 IGHV1-24A0A0C4DH33 117 aa14.38□□□□□ -0.11
CLIP2-201ENST00000223398 CLPSL1A2RUU4 121 aa14.38□□□□□ -0.11
CLIP2-201ENST00000223398 MPV17L2Q567V2 206 aa14.37□□□□□ -0.11
CLIP2-201ENST00000223398 DNAJC9-AS1A6NH13 148 aa14.37□□□□□ -0.11
CLIP2-201ENST00000223398 EGR2P11161 476 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-201ENST00000223398 KLF5Q13887 457 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-201ENST00000223398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-201ENST00000223398 IGKV2-29A2NJV5 120 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-201ENST00000223398 PLXNB3Q9ULL4 1909 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 ANKHD1Q8IWZ3 2542 aaKnown RBP14.36□□□□□ -0.11
CLIP2-201ENST00000223398 ZNF843Q8N446 348 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 TMEM126AQ9H061 195 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 A8MWP6 167 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 SPINK8P0C7L1 97 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 DEFB135Q30KP9 77 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 ADAMTSL5Q6ZMM2 481 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 SIRPDQ9H106 197 aa14.36□□□□□ -0.11
CLIP2-201ENST00000223398 C2orf82Q6UX34 121 aa14.35□□□□□ -0.11
CLIP2-201ENST00000223398 SMIM2Q9BVW6 85 aa14.35□□□□□ -0.11
CLIP2-201ENST00000223398 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
CLIP2-201ENST00000223398 C2orf70A6NJV1 201 aa14.35□□□□□ -0.11
CLIP2-201ENST00000223398 SPART-AS1P0CW21 52 aa14.35□□□□□ -0.11
CLIP2-201ENST00000223398 GYPEP15421 78 aa14.35□□□□□ -0.11
CLIP2-201ENST00000223398 SIGLEC8Q9NYZ4 499 aa14.35□□□□□ -0.11
CLIP2-201ENST00000223398 EML6Q6ZMW3 1958 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 IGKV1-17P01599 117 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 HIST1H4AP62805 103 aaKnown RBP14.34□□□□□ -0.11
CLIP2-201ENST00000223398 FAM231DQ6ZW35 169 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 KLF12Q9Y4X4 402 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 INAFM1C9JVW0 142 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 IGHV3-30P01768 117 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 IGHV3-33P01772 117 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 IGHV3-30-3P0DP02 117 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 IGHV3-30-5P0DP03 117 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 SNHG12Q9BXW3 62 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 SMIM27A0A1W2PRY6 76 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 LTAP01374 205 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 NCOR2Q9Y618 2525 aa14.34□□□□□ -0.11
CLIP2-201ENST00000223398 EDA2RQ9HAV5 297 aa14.33□□□□□ -0.12
CLIP2-201ENST00000223398 DEFB1P60022 68 aa14.33□□□□□ -0.12
CLIP2-201ENST00000223398 IGLV1-47P01700 117 aa14.33□□□□□ -0.12
CLIP2-201ENST00000223398 ATP5G1P05496 136 aa14.32□□□□□ -0.12
CLIP2-201ENST00000223398 C22orf34Q6ZV56 151 aa14.32□□□□□ -0.12
CLIP2-201ENST00000223398 IGLV10-54A0A075B6I4 117 aa14.32□□□□□ -0.12
CLIP2-201ENST00000223398 NCKAP5O14513 1909 aa14.32□□□□□ -0.12
CLIP2-201ENST00000223398 UBE2BP63146 152 aa14.32□□□□□ -0.12
CLIP2-201ENST00000223398 MORN5Q5VZ52 161 aa14.32□□□□□ -0.12
CLIP2-201ENST00000223398 NDUFA12Q9UI09 145 aa14.32□□□□□ -0.12
CLIP2-201ENST00000223398 F8W735 103 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-201ENST00000223398 MYCNOSP40205 109 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 CCL18P55774 89 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 KIR3DS1Q14943 382 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 Q0VG73 95 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 CRLF1O75462 422 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 TRBV12-3P01733 135 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 C16orf74Q96GX8 76 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 LOXL1Q08397 574 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-201ENST00000223398 C16orf54Q6UWD8 224 aa14.31□□□□□ -0.12
CLIP2-201ENST00000223398 FREM1Q5H8C1 2179 aa14.3□□□□□ -0.12
CLIP2-201ENST00000223398 C1orf43Q9BWL3 253 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms