RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 U3KQK5 164 aa11.79□□□□□ -0.52
TGFB1-201ENST00000221930 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
TGFB1-201ENST00000221930 BPESC1Q9GZL8 116 aa11.79□□□□□ -0.52
TGFB1-201ENST00000221930 ZFAND3Q9H8U3 227 aa11.79□□□□□ -0.52
TGFB1-201ENST00000221930 UBE2E1P51965 193 aa11.78□□□□□ -0.52
TGFB1-201ENST00000221930 WFDC2Q14508 124 aa11.78□□□□□ -0.52
TGFB1-201ENST00000221930 IL17RELQ6ZVW7 336 aa11.78□□□□□ -0.52
TGFB1-201ENST00000221930 FAM110DQ8TAY7 271 aaPredicted RBP11.78□□□□□ -0.52
TGFB1-201ENST00000221930 CCDC140Q96MF4 163 aa11.78□□□□□ -0.52
TGFB1-201ENST00000221930 ANAPC13Q9BS18 74 aa11.78□□□□□ -0.52
TGFB1-201ENST00000221930 IGLC6P0CF74 106 aa11.78□□□□□ -0.52
TGFB1-201ENST00000221930 MYO18BQ8IUG5 2567 aa11.78□□□□□ -0.52
TGFB1-201ENST00000221930 LINC00527Q9UJ94 153 aa11.77□□□□□ -0.53
TGFB1-201ENST00000221930 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.53
TGFB1-201ENST00000221930 CLPSL1A2RUU4 121 aa11.77□□□□□ -0.53
TGFB1-201ENST00000221930 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.53
TGFB1-201ENST00000221930 EFNA4P52798 201 aa11.77□□□□□ -0.53
TGFB1-201ENST00000221930 CACNG7P62955 275 aa11.77□□□□□ -0.53
TGFB1-201ENST00000221930 TMEM219Q86XT9 240 aa11.77□□□□□ -0.53
TGFB1-201ENST00000221930 OR9G4Q8NGQ1 327 aa11.77□□□□□ -0.53
TGFB1-201ENST00000221930 OR4X2Q8NGF9 303 aa11.76□□□□□ -0.53
TGFB1-201ENST00000221930 FABP5P3A8MUU1 101 aa11.76□□□□□ -0.53
TGFB1-201ENST00000221930 ID1P41134 155 aa11.76□□□□□ -0.53
TGFB1-201ENST00000221930 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.76□□□□□ -0.53
TGFB1-201ENST00000221930 PF4V1P10720 104 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 CITED1Q99966 193 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 CDIP1Q9H305 208 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 SMIM13P0DJ93 91 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 LMO4P61968 165 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 PAX8Q06710 450 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 Q6ZQT7 251 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 C18orf15Q96N68 181 aa11.75□□□□□ -0.53
TGFB1-201ENST00000221930 HBDP02042 147 aa11.74□□□□□ -0.53
TGFB1-201ENST00000221930 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
TGFB1-201ENST00000221930 EVI2AP22794 236 aa11.74□□□□□ -0.53
TGFB1-201ENST00000221930 A1L4Q6 167 aa11.74□□□□□ -0.53
TGFB1-201ENST00000221930 SH2D6Q7Z4S9 175 aa11.74□□□□□ -0.53
TGFB1-201ENST00000221930 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
TGFB1-201ENST00000221930 CENPVL3A0A0U1RRI6 287 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 PSMG3-AS1Q96PY0 264 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 C1QTNF4Q9BXJ3 329 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 AGPAT4-IT1Q9H0P7 198 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 C11orf21Q9P2W6 132 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 POLQO75417 2590 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 ABCA2Q9BZC7 2435 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
TGFB1-201ENST00000221930 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 NPFFO15130 113 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 MT-ATP8P03928 68 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 GNLYP22749 145 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 Q6ZUT4 128 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 C20orf78Q9BR46 151 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 TM2D2Q9BX73 214 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
TGFB1-201ENST00000221930 EPG5Q9HCE0 2579 aa11.71□□□□□ -0.53
TGFB1-201ENST00000221930 C19orf84I3L1E1 186 aa11.71□□□□□ -0.53
TGFB1-201ENST00000221930 LGALS9BQ3B8N2 356 aa11.71□□□□□ -0.53
TGFB1-201ENST00000221930 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
TGFB1-201ENST00000221930 DKK2Q9UBU2 259 aa11.71□□□□□ -0.53
TGFB1-201ENST00000221930 BRD3OSQ6XYD6 125 aa11.71□□□□□ -0.54
TGFB1-201ENST00000221930 C5orf56Q8N8D9 126 aa11.71□□□□□ -0.54
TGFB1-201ENST00000221930 EEF1AKMT3Q96AZ1 226 aa11.71□□□□□ -0.54
TGFB1-201ENST00000221930 METTL26Q96S19 204 aa11.71□□□□□ -0.54
TGFB1-201ENST00000221930 CNFNQ9BYD5 112 aa11.71□□□□□ -0.54
TGFB1-201ENST00000221930 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
TGFB1-201ENST00000221930 TNFRSF6BO95407 300 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 TRGV3P03979 118 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 INSL3P51460 131 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 LINC01559Q495D7 138 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 FAM208BQ5VWN6 2430 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 IGSF10Q6WRI0 2623 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 SYT8Q8NBV8 401 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 MAP1LC3AQ9H492 121 aa11.7□□□□□ -0.54
TGFB1-201ENST00000221930 LEPP41159 167 aa11.69□□□□□ -0.54
TGFB1-201ENST00000221930 TMEM78Q5T7P6 136 aa11.69□□□□□ -0.54
TGFB1-201ENST00000221930 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.547e-7■■■■□ 19.7
TGFB1-201ENST00000221930 NMUP48645 174 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 ATP5J2P56134 94 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 RBAKDNA6NC62 111 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 E9PLD3 99 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 XGP55808 180 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 SRSF2Q01130 221 aaKnown RBP11.68□□□□□ -0.54
TGFB1-201ENST00000221930 PCP2Q8IVA1 136 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 SPANXA1Q9NS26 97 aa11.68□□□□□ -0.54
TGFB1-201ENST00000221930 A0A087WX48 190 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 ATP6V0E2Q8NHE4 81 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 ZANQ9Y493 2812 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 GAGE7O76087 117 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 IGF1P05019 195 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
TGFB1-201ENST00000221930 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 FOXI1Q12951 378 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 GAGE4Q13068 117 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms