RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PSMG4Q5JS54 123 aa16.9■□□□□ 0.3
CCDC9-201ENST00000221922 ADAMTSL5Q6ZMM2 481 aa16.9■□□□□ 0.3
CCDC9-201ENST00000221922 LENEPQ9Y5L5 61 aa16.9■□□□□ 0.3
CCDC9-201ENST00000221922 CRYBG3Q68DQ2 2970 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 BLCAPP62952 87 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 HSD52Q0P140 79 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 OR4X2Q8NGF9 303 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 ZNF580Q9UK33 172 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 CHD6Q8TD26 2715 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 UNQ9165/PRO28630Q6UXU0 137 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 WFDC3Q8IUB2 231 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 Q8N8P6 123 aa16.89■□□□□ 0.29
CCDC9-201ENST00000221922 IGLV2-18A0A075B6J9 118 aa16.88■□□□□ 0.29
CCDC9-201ENST00000221922 EVI2AP22794 236 aa16.88■□□□□ 0.29
CCDC9-201ENST00000221922 CDKN1BP46527 198 aa16.88■□□□□ 0.29
CCDC9-201ENST00000221922 C18orf15Q96N68 181 aa16.88■□□□□ 0.29
CCDC9-201ENST00000221922 LRRK2Q5S007 2527 aa16.88■□□□□ 0.29
CCDC9-201ENST00000221922 ANKRD17O75179 2603 aaKnown RBP16.87■□□□□ 0.29
CCDC9-201ENST00000221922 IGHV7-4-1A0A0J9YVY3 117 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 A6NDN8 102 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 PRSS47A8MTI9 375 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 IGLV1-40P01703 118 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 GATA1P15976 413 aaPredicted RBP16.87■□□□□ 0.29
CCDC9-201ENST00000221922 ODF1Q14990 250 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 FAM208BQ5VWN6 2430 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 H3BRM9 83 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 PCP2Q8IVA1 136 aa16.87■□□□□ 0.29
CCDC9-201ENST00000221922 CELSR1Q9NYQ6 3014 aa16.86■□□□□ 0.29
CCDC9-201ENST00000221922 IGHV4-4A0A075B6R2 117 aa16.86■□□□□ 0.29
CCDC9-201ENST00000221922 IGHV3-11P01762 117 aa16.86■□□□□ 0.29
CCDC9-201ENST00000221922 Q6ZS46 218 aa16.86■□□□□ 0.29
CCDC9-201ENST00000221922 KLK15Q9H2R5 256 aa16.86■□□□□ 0.29
CCDC9-201ENST00000221922 FBN2P35556 2912 aa16.86■□□□□ 0.29
CCDC9-201ENST00000221922 CFHR3Q02985 330 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 OR2K2Q8NGT1 345 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 BEX4Q9NWD9 120 aaPredicted RBP16.85■□□□□ 0.29
CCDC9-201ENST00000221922 HHLA3Q9XRX5 114 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 OVOL1O14753 267 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 NMUP48645 174 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 TCTAP57738 103 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 DEFB112Q30KQ8 113 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 LINC00477Q96M19 166 aa16.85■□□□□ 0.29
CCDC9-201ENST00000221922 C9orf118A6NHY6 69 aa16.84■□□□□ 0.29
CCDC9-201ENST00000221922 TGFAP01135 160 aa16.84■□□□□ 0.29
CCDC9-201ENST00000221922 CST9LQ9H4G1 147 aa16.84■□□□□ 0.29
CCDC9-201ENST00000221922 NRACQ8N912 160 aa16.84■□□□□ 0.29
CCDC9-201ENST00000221922 TMEM158Q8WZ71 300 aa16.84■□□□□ 0.29
CCDC9-201ENST00000221922 C20orf173Q96LM9 149 aa16.84■□□□□ 0.29
CCDC9-201ENST00000221922 SOCS3O14543 225 aa16.83■□□□□ 0.28
CCDC9-201ENST00000221922 SMIM15Q7Z3B0 74 aa16.83■□□□□ 0.28
CCDC9-201ENST00000221922 GPHB5Q86YW7 130 aa16.83■□□□□ 0.28
CCDC9-201ENST00000221922 OR10J6PQ8NGY7 276 aa16.83■□□□□ 0.28
CCDC9-201ENST00000221922 SMPXQ9UHP9 88 aa16.83■□□□□ 0.28
CCDC9-201ENST00000221922 IGHV4-59P01825 116 aa16.82■□□□□ 0.28
CCDC9-201ENST00000221922 PCP4P48539 62 aa16.82■□□□□ 0.28
CCDC9-201ENST00000221922 KRTAP10-9P60411 292 aa16.82■□□□□ 0.28
CCDC9-201ENST00000221922 LRRC75A-AS1Q8N1F1 130 aa16.82■□□□□ 0.28
CCDC9-201ENST00000221922 ATP5LO75964 103 aa16.82■□□□□ 0.28
CCDC9-201ENST00000221922 PRSS1P07477 247 aa16.82■□□□□ 0.28
CCDC9-201ENST00000221922 MAP1AP78559 2803 aaPredicted RBP16.82■□□□□ 0.28
CCDC9-201ENST00000221922 RNF223E7ERA6 249 aa16.81■□□□□ 0.28
CCDC9-201ENST00000221922 KIR3DS1Q14943 382 aa16.81■□□□□ 0.28
CCDC9-201ENST00000221922 DEFB113Q30KQ7 82 aa16.81■□□□□ 0.28
CCDC9-201ENST00000221922 FSHBP01225 129 aa16.81■□□□□ 0.28
CCDC9-201ENST00000221922 IGKCP01834 107 aa16.81■□□□□ 0.28
CCDC9-201ENST00000221922 UFSP1Q6NVU6 142 aa16.81■□□□□ 0.28
CCDC9-201ENST00000221922 MAPK1IP1LQ8NDC0 245 aa16.81■□□□□ 0.28
CCDC9-201ENST00000221922 DAZ1Q9NQZ3 744 aaKnown RBP16.81■□□□□ 0.28
CCDC9-201ENST00000221922 GAGE12BA1L429 117 aa16.8■□□□□ 0.28
CCDC9-201ENST00000221922 IGHV4-31P0DP07 118 aa16.8■□□□□ 0.28
CCDC9-201ENST00000221922 OCIAD2Q56VL3 154 aa16.8■□□□□ 0.28
CCDC9-201ENST00000221922 HIGD1BQ9P298 99 aa16.8■□□□□ 0.28
CCDC9-201ENST00000221922 ZFHX3Q15911 3703 aa16.8■□□□□ 0.28
CCDC9-201ENST00000221922 IGKV2D-26A0A0A0MRZ7 120 aa16.79■□□□□ 0.28
CCDC9-201ENST00000221922 SMIM17P0DL12 118 aa16.79■□□□□ 0.28
CCDC9-201ENST00000221922 Q6ZQT7 251 aa16.79■□□□□ 0.28
CCDC9-201ENST00000221922 GAGE10A6NGK3 116 aa16.79■□□□□ 0.28
CCDC9-201ENST00000221922 LAGE3Q14657 143 aa16.79■□□□□ 0.28
CCDC9-201ENST00000221922 FOXC2Q99958 501 aa16.79■□□□□ 0.28
CCDC9-201ENST00000221922 RHPN1-AS1Q9BWJ2 59 aa16.79■□□□□ 0.28
CCDC9-201ENST00000221922 K7EMT4 169 aa16.78■□□□□ 0.28
CCDC9-201ENST00000221922 RPL11P62913 178 aaKnown RBP16.78■□□□□ 0.28
CCDC9-201ENST00000221922 PRR9Q5T870 116 aa16.78■□□□□ 0.28
CCDC9-201ENST00000221922 AP1S3Q96PC3 154 aa16.78■□□□□ 0.28
CCDC9-201ENST00000221922 JMJD8Q96S16 334 aa16.78■□□□□ 0.28
CCDC9-201ENST00000221922 DPM2O94777 84 aa16.77■□□□□ 0.28
CCDC9-201ENST00000221922 SPANXN1Q5VSR9 72 aa16.77■□□□□ 0.28
CCDC9-201ENST00000221922 LCNL1Q6ZST4 164 aa16.77■□□□□ 0.28
CCDC9-201ENST00000221922 UFC1Q9Y3C8 167 aa16.77■□□□□ 0.28
CCDC9-201ENST00000221922 CR1P17927 2039 aa16.77■□□□□ 0.28
CCDC9-201ENST00000221922 TRAV26-2A0A0B4J265 109 aa16.77■□□□□ 0.27
CCDC9-201ENST00000221922 Q5PR19 223 aa16.77■□□□□ 0.27
CCDC9-201ENST00000221922 GTF2H5Q6ZYL4 71 aa16.77■□□□□ 0.27
CCDC9-201ENST00000221922 TRAV21A0A0B4J279 112 aa16.76■□□□□ 0.27
CCDC9-201ENST00000221922 TMEM89A2RUT3 159 aa16.76■□□□□ 0.27
CCDC9-201ENST00000221922 HLA-DRB4P13762 266 aa16.76■□□□□ 0.27
CCDC9-201ENST00000221922 SAMD13Q5VXD3 122 aa16.76■□□□□ 0.27
CCDC9-201ENST00000221922 ZFAND2AQ8N6M9 145 aa16.76■□□□□ 0.27
CCDC9-201ENST00000221922 MRAP2Q96G30 205 aa16.76■□□□□ 0.27
CCDC9-201ENST00000221922 HLA-DRB4X5D2U9 266 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms