RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GNLYP22749 145 aa11.61□□□□□ -0.55
EFNB1-201ENST00000204961 LINC00477Q96M19 166 aa11.61□□□□□ -0.55
EFNB1-201ENST00000204961 NIPBLQ6KC79 2804 aaeCLIP11.6□□□□□ -0.55
EFNB1-201ENST00000204961 BUB3O43684 328 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 PAX2Q02962 417 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 C8orf86Q6ZUL3 223 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 NPBQ8NG41 125 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 METTL26Q96S19 204 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
EFNB1-201ENST00000204961 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 KLRB1Q12918 225 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 PRR9Q5T870 116 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 TTC9CQ8N5M4 171 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 C9orf118A6NHY6 69 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 SMAD7O15105 426 aaKnown RBP11.6□□□□□ -0.55
EFNB1-201ENST00000204961 FAM74A4Q5TZK3 123 aa11.6□□□□□ -0.55
EFNB1-201ENST00000204961 GNRH2O43555 120 aa11.59□□□□□ -0.55
EFNB1-201ENST00000204961 F5H697 171 aa11.59□□□□□ -0.55
EFNB1-201ENST00000204961 RPL39LQ96EH5 51 aaKnown RBP11.59□□□□□ -0.55
EFNB1-201ENST00000204961 JPT2Q9H910 190 aa11.59□□□□□ -0.55
EFNB1-201ENST00000204961 TMEM8BA6NDV4 472 aa11.58□□□□□ -0.55
EFNB1-201ENST00000204961 ODF3BA8MYP8 253 aa11.58□□□□□ -0.55
EFNB1-201ENST00000204961 NBL1P41271 181 aa11.58□□□□□ -0.55
EFNB1-201ENST00000204961 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.55
EFNB1-201ENST00000204961 DOPEY1Q5JWR5 2465 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 TGFAP01135 160 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 IGHV4-38-2P0DP08 117 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 SEC11AP67812 179 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 SMIM17P0DL12 118 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 ATP5G2Q06055 141 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 C10orf99Q6UWK7 81 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 RNF185Q96GF1 192 aa11.58□□□□□ -0.56
EFNB1-201ENST00000204961 FXYD2P54710 66 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 C20orf173Q96LM9 149 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 RNF5Q99942 180 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 TEX48A0A1B0GUV7 120 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 K7EP34 96 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 AMTNQ6UX39 209 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 ZNF502Q8TBZ5 544 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 HIVEP2P31629 2446 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 H3BUX3 64 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 M0R1W7 72 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 SCGB2A1O75556 95 aa11.57□□□□□ -0.56
EFNB1-201ENST00000204961 A0A087WWL8 130 aa11.56□□□□□ -0.56
EFNB1-201ENST00000204961 NPFFO15130 113 aa11.56□□□□□ -0.56
EFNB1-201ENST00000204961 FABP2P12104 132 aa11.56□□□□□ -0.56
EFNB1-201ENST00000204961 SCGB2A2Q13296 93 aa11.56□□□□□ -0.56
EFNB1-201ENST00000204961 CENPVL3A0A0U1RRI6 287 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 CIDEAO60543 219 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 PDE6HQ13956 83 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 CLPSL1A2RUU4 121 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 G3V4G9 280 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 H3BRM9 83 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 FGF6P10767 208 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 PAX8Q06710 450 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 SAMD13Q5VXD3 122 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 TRAV12-2A0A075B6T6 113 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 SIRPDQ9H106 197 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 PHLDA3Q9Y5J5 127 aa11.55□□□□□ -0.56
EFNB1-201ENST00000204961 TRAV8-2A0A0B4J237 113 aa11.54□□□□□ -0.56
EFNB1-201ENST00000204961 TRAV41A0A0B4J266 112 aa11.54□□□□□ -0.56
EFNB1-201ENST00000204961 A0A1W2PPM0 123 aa11.54□□□□□ -0.56
EFNB1-201ENST00000204961 Q6AWC8 147 aa11.54□□□□□ -0.56
EFNB1-201ENST00000204961 ZFAND3Q9H8U3 227 aa11.54□□□□□ -0.56
EFNB1-201ENST00000204961 ZNF575Q86XF7 245 aa11.54□□□□□ -0.56
EFNB1-201ENST00000204961 MYOZ3Q8TDC0 251 aa11.54□□□□□ -0.56
EFNB1-201ENST00000204961 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 HSD52Q0P140 79 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 C11orf71Q6IPW1 123 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 UFSP1Q6NVU6 142 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 MAPKAPK5-AS1Q8N8E1 139 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 IGHV3-64A0A075B6Q5 118 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 PRM2P04554 102 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 IGLC6P0CF74 106 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 NPFFR1Q9GZQ6 430 aa11.53□□□□□ -0.56
EFNB1-201ENST00000204961 IGKCP01834 107 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 SMIM13P0DJ93 91 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 LMO4P61968 165 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 FAM110DQ8TAY7 271 aaPredicted RBP11.52□□□□□ -0.57
EFNB1-201ENST00000204961 CYSLTR1Q9Y271 337 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 AZU1P20160 251 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 ANXA2RQ3ZCQ2 193 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 SH2D6Q7Z4S9 175 aa11.52□□□□□ -0.57
EFNB1-201ENST00000204961 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 UBE2E1P51965 193 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 RPS20P60866 119 aaKnown RBP11.51□□□□□ -0.57
EFNB1-201ENST00000204961 CD300EQ496F6 205 aaPredicted RBP11.51□□□□□ -0.57
EFNB1-201ENST00000204961 BOD1L2Q8IYS8 172 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 IGHV4-39P01824 125 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 ADAMTSL5Q6ZMM2 481 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 HIST1H4GQ99525 98 aa11.51□□□□□ -0.57
EFNB1-201ENST00000204961 ZNF256Q9Y2P7 627 aaPredicted RBP11.51□□□□□ -0.57
EFNB1-201ENST00000204961 TSSC4Q9Y5U2 329 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms