RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 FMC1Q96HJ9 113 aa12.23□□□□□ -0.45
MRPL28-201ENST00000199706 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 GCGP01275 180 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 SULT1A2P50226 295 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 FAM3BP58499 235 aaPredicted RBP12.22□□□□□ -0.45
MRPL28-201ENST00000199706 MUC21Q5SSG8 566 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 PRNTQ86SH4 94 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 C9orf62Q8N4C0 152 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 POM121L12Q8N7R1 296 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 SDF2L1Q9HCN8 221 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 ZFP30Q9Y2G7 519 aa12.22□□□□□ -0.45
MRPL28-201ENST00000199706 hCG_2014768A0A024R1R8 64 aa12.21□□□□□ -0.45
MRPL28-201ENST00000199706 TRGV2A0A075B6R0 118 aa12.21□□□□□ -0.45
MRPL28-201ENST00000199706 TMEM183BQ1AE95 376 aa12.21□□□□□ -0.45
MRPL28-201ENST00000199706 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
MRPL28-201ENST00000199706 RASL10AQ92737 203 aa12.21□□□□□ -0.45
MRPL28-201ENST00000199706 SGK494Q96LW2 274 aa12.21□□□□□ -0.45
MRPL28-201ENST00000199706 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 PAGE4O60829 102 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 S100A9P06702 114 aaKnown RBP12.2□□□□□ -0.46
MRPL28-201ENST00000199706 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
MRPL28-201ENST00000199706 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 LINC00479Q96M42 142 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 C8orf49Q96NF6 230 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 TXNDC17Q9BRA2 123 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 MANBALQ9NQG1 85 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 NAGKQ9UJ70 344 aa12.2□□□□□ -0.46
MRPL28-201ENST00000199706 TYMSP04818 313 aa12.19□□□□□ -0.46
MRPL28-201ENST00000199706 HOXA5P20719 270 aa12.19□□□□□ -0.46
MRPL28-201ENST00000199706 TRAV34A0A0B4J273 112 aa12.18□□□□□ -0.46
MRPL28-201ENST00000199706 LTAP01374 205 aa12.18□□□□□ -0.46
MRPL28-201ENST00000199706 UBE2G1P62253 170 aa12.18□□□□□ -0.46
MRPL28-201ENST00000199706 SLAQ13239 276 aa12.18□□□□□ -0.46
MRPL28-201ENST00000199706 PTH2Q96A98 100 aa12.18□□□□□ -0.46
MRPL28-201ENST00000199706 TRAV26-1A0A087WT03 109 aa12.17□□□□□ -0.46
MRPL28-201ENST00000199706 M0R2P5 195 aa12.17□□□□□ -0.46
MRPL28-201ENST00000199706 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
MRPL28-201ENST00000199706 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
MRPL28-201ENST00000199706 NACAE9PAV3 2078 aa12.17□□□□□ -0.46
MRPL28-201ENST00000199706 FABP5P3A8MUU1 101 aa12.16□□□□□ -0.46
MRPL28-201ENST00000199706 AKR1C3P42330 323 aa12.16□□□□□ -0.46
MRPL28-201ENST00000199706 OR5I1Q13606 314 aa12.16□□□□□ -0.46
MRPL28-201ENST00000199706 GNRH2O43555 120 aa12.15□□□□□ -0.46
MRPL28-201ENST00000199706 PIK3CD-AS1Q5SR53 167 aa12.15□□□□□ -0.46
MRPL28-201ENST00000199706 UBE2DNLQ8IWF7 75 aa12.15□□□□□ -0.46
MRPL28-201ENST00000199706 C11orf52Q96A22 123 aa12.15□□□□□ -0.46
MRPL28-201ENST00000199706 C9orf85Q96MD7 179 aa12.15□□□□□ -0.46
MRPL28-201ENST00000199706 CIDEAO60543 219 aa12.14□□□□□ -0.47
MRPL28-201ENST00000199706 TAGLN2P37802 199 aaKnown RBP12.14□□□□□ -0.47
MRPL28-201ENST00000199706 DNLZQ5SXM8 178 aa12.14□□□□□ -0.47
MRPL28-201ENST00000199706 FAM162BQ5T6X4 162 aa12.14□□□□□ -0.47
MRPL28-201ENST00000199706 ZC2HC1AQ96GY0 325 aa12.14□□□□□ -0.47
MRPL28-201ENST00000199706 PRO0255Q9UI72 69 aa12.14□□□□□ -0.47
MRPL28-201ENST00000199706 TRAV4A0A0B4J268 109 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 A0A1B0GV50 99 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 A0A1B0GVG6 124 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 NUDT3O95989 172 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 CCL18P55774 89 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 ZNF674Q2M3X9 581 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
MRPL28-201ENST00000199706 IGKV3D-20A0A0C4DH25 116 aa12.12□□□□□ -0.47
MRPL28-201ENST00000199706 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
MRPL28-201ENST00000199706 IFNA1P01562 189 aa12.12□□□□□ -0.47
MRPL28-201ENST00000199706 CCL20P78556 96 aa12.12□□□□□ -0.47
MRPL28-201ENST00000199706 FHL2Q14192 279 aa12.12□□□□□ -0.47
MRPL28-201ENST00000199706 MLST8Q9BVC4 326 aa12.12□□□□□ -0.47
MRPL28-201ENST00000199706 RNASE3P12724 160 aaKnown RBP12.11□□□□□ -0.47
MRPL28-201ENST00000199706 CRIP1P50238 77 aa12.11□□□□□ -0.47
MRPL28-201ENST00000199706 MEF2BQ02080 365 aaPredicted RBP12.11□□□□□ -0.47
MRPL28-201ENST00000199706 LINC01559Q495D7 138 aa12.11□□□□□ -0.47
MRPL28-201ENST00000199706 IL36BQ9NZH7 164 aa12.11□□□□□ -0.47
MRPL28-201ENST00000199706 DNAH10Q8IVF4 4471 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 PDE6DO43924 150 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 SH2D1AO60880 128 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 BCL2P10415 239 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 CRYBA4P53673 196 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 SMIM12Q96EX1 92 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
MRPL28-201ENST00000199706 A0A0J9YY99 117 aa12.09□□□□□ -0.47
MRPL28-201ENST00000199706 KRBOX1C9JBD0 128 aa12.09□□□□□ -0.47
MRPL28-201ENST00000199706 PAX4O43316 350 aa12.09□□□□□ -0.47
MRPL28-201ENST00000199706 CXCL1P09341 107 aa12.09□□□□□ -0.47
MRPL28-201ENST00000199706 ASIPP42127 132 aa12.09□□□□□ -0.47
MRPL28-201ENST00000199706 ZNF876PQ49A33 203 aa12.09□□□□□ -0.47
MRPL28-201ENST00000199706 OR4C5Q8NGB2 326 aa12.09□□□□□ -0.47
MRPL28-201ENST00000199706 FRAS1Q86XX4 4008 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 A0A096LPF7 62 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 TRGV4A0A0C4DH28 118 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 B4DEV8 164 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 ORM1P02763 201 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 RPL35P42766 123 aaKnown RBP12.08□□□□□ -0.48
MRPL28-201ENST00000199706 BLOC1S1P78537 153 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 Q6ZR54 194 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 BAGE2Q86Y30 109 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 LYPD6BQ8NI32 183 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms