RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 EVI2AP22794 236 aa6.24□□□□□ -1.41
VAMP3-201ENST00000054666 RNASE4P34096 147 aaKnown RBP6.24□□□□□ -1.41
VAMP3-201ENST00000054666 DEFB1P60022 68 aa6.24□□□□□ -1.41
VAMP3-201ENST00000054666 NUTF2P61970 127 aaKnown RBP6.24□□□□□ -1.41
VAMP3-201ENST00000054666 UBE2E2Q96LR5 201 aa6.24□□□□□ -1.41
VAMP3-201ENST00000054666 ZMAT5Q9UDW3 170 aaKnown RBP6.24□□□□□ -1.41
VAMP3-201ENST00000054666 PHLDA3Q9Y5J5 127 aa6.24□□□□□ -1.41
VAMP3-201ENST00000054666 USP9YO00507 2555 aaPredicted RBP6.24□□□□□ -1.41
VAMP3-201ENST00000054666 A0A096LNJ9 63 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 EDN2P20800 178 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 TSPOP30536 169 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 SYNJ2BPP57105 145 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 PTPN13Q12923 2485 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 APRG1Q8IVJ8 170 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 DCANP1Q8TF63 244 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 FAM19A4Q96LR4 140 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 SELENOKQ9Y6D0 94 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 CSMD2Q7Z408 3487 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 M0R381 172 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 LGALS9O00182 355 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 TFPI2P48307 235 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 ANXA2RQ3ZCQ2 193 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 Q6ZQT7 251 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 OR2K2Q8NGT1 345 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 MYOZ3Q8TDC0 251 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 MRAP2Q96G30 205 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 MS4A6AQ9H2W1 248 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 NAV2Q8IVL1 2488 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 CRYBG3Q68DQ2 2970 aa6.23□□□□□ -1.41
VAMP3-201ENST00000054666 UBR5O95071 2799 aaPredicted RBP6.22□□□□□ -1.41
VAMP3-201ENST00000054666 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 A0A087WW49 117 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 ZNF688P0C7X2 276 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 HOXD3P31249 432 aaPredicted RBP6.22□□□□□ -1.41
VAMP3-201ENST00000054666 LEPP41159 167 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 LGALS9BQ3B8N2 356 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 PSMG4Q5JS54 123 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 LGALS9CQ6DKI2 356 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 FAM159AQ6UWV7 190 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 AP1S3Q96PC3 154 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 PMCHL2Q9BQD1 86 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 MRPS16Q9Y3D3 137 aaKnown RBP6.22□□□□□ -1.41
VAMP3-201ENST00000054666 GOLT1BQ9Y3E0 138 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 POLQO75417 2590 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 COL5A1-AS1Q5SY13 56 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 SLC25A34Q6PIV7 304 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 RNF152Q8N8N0 203 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 Q8N8P6 123 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 ODF3Q96PU9 254 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 MCRIP2Q9BUT9 160 aaKnown RBP6.22□□□□□ -1.41
VAMP3-201ENST00000054666 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
VAMP3-201ENST00000054666 FBN2P35556 2912 aa6.21□□□□□ -1.41
VAMP3-201ENST00000054666 LINC01546A6NGU7 62 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 KLLNB2CW77 178 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
VAMP3-201ENST00000054666 FCER1GP30273 86 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 FXYD7P58549 80 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 KHDC1LQ5JSQ8 128 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 DUX5Q96PT3 197 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 K7EQG2 157 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 GAS8-AS1O95177 125 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 Q8N2B8 174 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 TMEM86BQ8N661 226 aa6.21□□□□□ -1.42
VAMP3-201ENST00000054666 C7orf71A4D174 169 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 TCAPO15273 167 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
VAMP3-201ENST00000054666 MGPP08493 103 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 KIR3DS1Q14943 382 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 NRACQ8N912 160 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 SCRT2Q9NQ03 307 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 EPG5Q9HCE0 2579 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 DOPEY2Q9Y3R5 2298 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 CELSR2Q9HCU4 2923 aa6.2□□□□□ -1.42
VAMP3-201ENST00000054666 A0A0J9YX75 114 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 SMIM17P0DL12 118 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 LAGE3Q14657 143 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 TMEM158Q8WZ71 300 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 DPF1Q92782 380 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 C18orf15Q96N68 181 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 PEMTQ9UBM1 199 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 TRAV12-3A0A0B4J271 114 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 PRSS47A8MTI9 375 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 LINC01619G3V211 115 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 GNRH2O43555 120 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 ATP5LO75964 103 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 PPP1R17O96001 155 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 CD7P09564 240 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
VAMP3-201ENST00000054666 HINT1P49773 126 aaPredicted RBP6.19□□□□□ -1.42
VAMP3-201ENST00000054666 DEFB125Q8N687 156 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 C14orf178Q8N769 122 aaPredicted RBP6.19□□□□□ -1.42
VAMP3-201ENST00000054666 SMIM2Q9BVW6 85 aa6.19□□□□□ -1.42
VAMP3-201ENST00000054666 IGLV2-18A0A075B6J9 118 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 CDKN1BP46527 198 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 SLURP1P55000 103 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 554.5 ms