RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZC2HC1BQ5TFG8 222 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 Q6ZS46 218 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 CHCHD1Q96BP2 118 aaKnown RBP9.4□□□□□ -0.9
CHPF2-201ENST00000035307 SIRPDQ9H106 197 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 MRPL51Q4U2R6 128 aaKnown RBP9.39□□□□□ -0.91
CHPF2-201ENST00000035307 LINC01587Q99440 93 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 PRSS46E5RG02 174 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 IGLC2P0DOY2 106 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 IGLC3P0DOY3 106 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 Q8N9W7 124 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 SYT8Q8NBV8 401 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 KLK9Q9UKQ9 250 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 DSCR9P59020 149 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 PLP1P60201 277 aa9.39□□□□□ -0.91
CHPF2-201ENST00000035307 MRPL27Q9P0M9 148 aaKnown RBP9.39□□□□□ -0.91
CHPF2-201ENST00000035307 OOSP1A8MZH6 123 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 CRXO43186 299 aaPredicted RBP9.38□□□□□ -0.91
CHPF2-201ENST00000035307 WIPF2Q8TF74 440 aaPredicted RBP9.38□□□□□ -0.91
CHPF2-201ENST00000035307 UBE2E2Q96LR5 201 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 IGHV3-53P01767 116 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 FAM110DQ8TAY7 271 aaPredicted RBP9.38□□□□□ -0.91
CHPF2-201ENST00000035307 DLEU1O43261 78 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 TRBV12-3P01733 135 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 CTSGP08311 255 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 SIGLEC8Q9NYZ4 499 aa9.38□□□□□ -0.91
CHPF2-201ENST00000035307 A0A1B0GW15 77 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 FAM104BQ5XKR9 115 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 KLHL30-AS1Q8NEE0 82 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 ZNF418Q8TF45 676 aaPredicted RBP9.37□□□□□ -0.91
CHPF2-201ENST00000035307 RAX2Q96IS3 184 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 AGPAT4-IT1Q9H0P7 198 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 ATP5LO75964 103 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 FAM231DQ6ZW35 169 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 J3QR89 54 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 K7EMI3 77 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 LTAP01374 205 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 TTTY13Q9BZ97 58 aa9.37□□□□□ -0.91
CHPF2-201ENST00000035307 TRBV7-1A0A0A6YYK4 115 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 C1orf159Q96HA4 380 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 NXT2Q9NPJ8 142 aaKnown RBP9.36□□□□□ -0.91
CHPF2-201ENST00000035307 SPCS1Q9Y6A9 102 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
CHPF2-201ENST00000035307 K7ERU9 68 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 LGALS3P17931 250 aaKnown RBP9.36□□□□□ -0.91
CHPF2-201ENST00000035307 NPC2P61916 151 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 PEF1Q9UBV8 284 aaKnown RBP9.36□□□□□ -0.91
CHPF2-201ENST00000035307 DPM2O94777 84 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 RASL11AQ6T310 242 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 TTC9CQ8N5M4 171 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 SPOCK3Q9BQ16 436 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 CYSLTR1Q9Y271 337 aa9.36□□□□□ -0.91
CHPF2-201ENST00000035307 IGLV2-8P01709 118 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
CHPF2-201ENST00000035307 GDF5OSQ5U4N7 250 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 C20orf144Q9BQM9 153 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 ST20Q9HBF5 79 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 TNFRSF18Q9Y5U5 241 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 IGKCP01834 107 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 SMIM13P0DJ93 91 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 FANCD2OSQ96PS1 177 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 SRSF1Q07955 248 aaKnown RBP eCLIP9.35□□□□□ -0.911e-6■■■□□ 17.1
CHPF2-201ENST00000035307 PDE6HQ13956 83 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 C9orf139Q6ZV77 190 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 LY6G5BQ8NDX9 201 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 DKK2Q9UBU2 259 aa9.35□□□□□ -0.91
CHPF2-201ENST00000035307 GNRH2O43555 120 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 PF4P02776 101 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 RRN3P1Q2M238 152 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 OR2K2Q8NGT1 345 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 CFHR4Q92496 578 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 CSTL1Q9H114 145 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 MEGF9Q9H1U4 602 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 MRPL16Q9NX20 251 aaKnown RBP9.34□□□□□ -0.91
CHPF2-201ENST00000035307 PPBPP02775 128 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 DEFB131AP59861 70 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 ANXA2RQ3ZCQ2 193 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 DAZ1Q9NQZ3 744 aaKnown RBP9.34□□□□□ -0.91
CHPF2-201ENST00000035307 IGLV11-55A0A075B6I3 123 aa9.34□□□□□ -0.91
CHPF2-201ENST00000035307 PHLDA1Q8WV24 401 aaPredicted RBP9.34□□□□□ -0.91
CHPF2-201ENST00000035307 IGHV3-16A0A0C4DH30 117 aa9.33□□□□□ -0.92
CHPF2-201ENST00000035307 LAGE3Q14657 143 aa9.33□□□□□ -0.92
CHPF2-201ENST00000035307 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
CHPF2-201ENST00000035307 GEMIN7Q9H840 131 aaKnown RBP9.33□□□□□ -0.92
CHPF2-201ENST00000035307 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
CHPF2-201ENST00000035307 TMEM14CQ9P0S9 112 aa9.33□□□□□ -0.92
CHPF2-201ENST00000035307 TOMM7Q9P0U1 55 aa9.33□□□□□ -0.92
CHPF2-201ENST00000035307 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 TEX43Q6ZNM6 134 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 ORAOV1Q8WV07 137 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
CHPF2-201ENST00000035307 OVOL1O14753 267 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 TNFRSF13BO14836 293 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms