RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PMS2P11Q13670 270 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 RRN3P1Q2M238 152 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 Q86TA4 180 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 TMEM256Q8N2U0 113 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 TCEAL7Q9BRU2 100 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 TENM3Q9P273 2699 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 COL7A1Q02388 2944 aa9.49□□□□□ -0.89
GTF3A-209ENST00000640289 LOC102723971A0A1B0GUV8 181 aa9.49□□□□□ -0.89
GTF3A-209ENST00000640289 EMP1P54849 157 aa9.49□□□□□ -0.89
GTF3A-209ENST00000640289 TAS2R60P59551 318 aa9.49□□□□□ -0.89
GTF3A-209ENST00000640289 UBE2G1P62253 170 aa9.49□□□□□ -0.89
GTF3A-209ENST00000640289 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
GTF3A-209ENST00000640289 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
GTF3A-209ENST00000640289 NDFIP1Q9BT67 221 aa9.49□□□□□ -0.89
GTF3A-209ENST00000640289 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
GTF3A-209ENST00000640289 ZNF80P51504 273 aaPredicted RBP9.48□□□□□ -0.89
GTF3A-209ENST00000640289 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 Q6AWC8 147 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 TXNDC17Q9BRA2 123 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 VAX2Q9UIW0 290 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 CELA1Q9UNI1 258 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 KLF12Q9Y4X4 402 aa9.48□□□□□ -0.89
GTF3A-209ENST00000640289 PLAC8L1A1L4L8 177 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 RBFOX3A6NFN3 312 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 GCGP01275 180 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 SAPCD1Q5SSQ6 148 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 IL17DQ8TAD2 202 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 TP53TG3Q9ULZ0 132 aa9.47□□□□□ -0.89
GTF3A-209ENST00000640289 TGP01266 2768 aa9.46□□□□□ -0.89
GTF3A-209ENST00000640289 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 TRBV6-1A0A0K0K1D8 114 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 RGS13O14921 159 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 LTAP01374 205 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 NANOS2P60321 138 aaKnown RBP9.46□□□□□ -0.9
GTF3A-209ENST00000640289 IFITM2Q01629 132 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 SMUG1Q53HV7 270 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 TOR2AQ5JU69 321 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 NHLRC2Q8NBF2 726 aa9.46□□□□□ -0.9
GTF3A-209ENST00000640289 TRAV21A0A0B4J279 112 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 TMEM189A5PLL7 270 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 CBY3A6NI87 242 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 PDE6DO43924 150 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 TAGLN2P37802 199 aaKnown RBP9.45□□□□□ -0.9
GTF3A-209ENST00000640289 RPL35P42766 123 aaKnown RBP9.45□□□□□ -0.9
GTF3A-209ENST00000640289 ZNF506Q5JVG8 444 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 ZNF767PQ75MW2 155 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 EIF4E3Q8N5X7 224 aaKnown RBP9.45□□□□□ -0.9
GTF3A-209ENST00000640289 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
GTF3A-209ENST00000640289 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
GTF3A-209ENST00000640289 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 NAGKQ9UJ70 344 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 ZFP30Q9Y2G7 519 aa9.45□□□□□ -0.9
GTF3A-209ENST00000640289 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
GTF3A-209ENST00000640289 S100A9P06702 114 aaKnown RBP9.44□□□□□ -0.9
GTF3A-209ENST00000640289 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
GTF3A-209ENST00000640289 FAM222AQ5U5X8 452 aa9.44□□□□□ -0.9
GTF3A-209ENST00000640289 MUC7Q8TAX7 377 aa9.44□□□□□ -0.9
GTF3A-209ENST00000640289 EIF5A2Q9GZV4 153 aaKnown RBP9.44□□□□□ -0.9
GTF3A-209ENST00000640289 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
GTF3A-209ENST00000640289 DKK2Q9UBU2 259 aa9.44□□□□□ -0.9
GTF3A-209ENST00000640289 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 PFN1P07737 140 aaKnown RBP9.43□□□□□ -0.9
GTF3A-209ENST00000640289 CRIP1P50238 77 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 FAM159AQ6UWV7 190 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 ZNF493Q6ZR52 646 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 TMEM183AQ8IXX5 376 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 C11orf72Q8NBR9 251 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 GSN-AS1Q9NRJ2 163 aa9.43□□□□□ -0.9
GTF3A-209ENST00000640289 GNRH2O43555 120 aa9.42□□□□□ -0.9
GTF3A-209ENST00000640289 SPART-AS1P0CW21 52 aa9.42□□□□□ -0.9
GTF3A-209ENST00000640289 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
GTF3A-209ENST00000640289 COX8CQ7Z4L0 72 aa9.42□□□□□ -0.9
GTF3A-209ENST00000640289 NOP10Q9NPE3 64 aaKnown RBP9.42□□□□□ -0.9
GTF3A-209ENST00000640289 DNAH7Q8WXX0 4024 aa9.42□□□□□ -0.9
GTF3A-209ENST00000640289 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 PGPEP1LA6NFU8 196 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 FABP5P3A8MUU1 101 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 SNURFLB1AK76 121 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 TYMSP04818 313 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 TDRG1Q3Y452 100 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 CENPWQ5EE01 88 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 Q6ZTC4 211 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 MLST8Q9BVC4 326 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 MDFICQ9P1T7 246 aa9.41□□□□□ -0.9
GTF3A-209ENST00000640289 TIMM8BQ9Y5J9 83 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms