RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
SMN2-216ENST00000638794 C8orf49Q96NF6 230 aa11.53□□□□□ -0.56
SMN2-216ENST00000638794 SCRT2Q9NQ03 307 aa11.53□□□□□ -0.56
SMN2-216ENST00000638794 TRBV7-9A0A0J9YWB2 115 aa11.52□□□□□ -0.57
SMN2-216ENST00000638794 OR7C2O60412 319 aa11.52□□□□□ -0.57
SMN2-216ENST00000638794 FHL2Q14192 279 aa11.52□□□□□ -0.57
SMN2-216ENST00000638794 MUC21Q5SSG8 566 aa11.52□□□□□ -0.57
SMN2-216ENST00000638794 ENKURQ8TC29 256 aa11.52□□□□□ -0.57
SMN2-216ENST00000638794 HHLA3Q9XRX5 114 aa11.52□□□□□ -0.57
SMN2-216ENST00000638794 FAT1Q14517 4588 aa11.51□□□□□ -0.57
SMN2-216ENST00000638794 RANP62826 216 aaKnown RBP11.51□□□□□ -0.57
SMN2-216ENST00000638794 SLAQ13239 276 aa11.51□□□□□ -0.57
SMN2-216ENST00000638794 ZNF266Q14584 549 aa11.51□□□□□ -0.57
SMN2-216ENST00000638794 LINC00299Q6ZSB3 139 aa11.51□□□□□ -0.57
SMN2-216ENST00000638794 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 C17orf112F2Z3M2 114 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 PRAF2O60831 178 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 CSN1S1P47710 185 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
SMN2-216ENST00000638794 MRPL23Q16540 153 aaKnown RBP11.5□□□□□ -0.57
SMN2-216ENST00000638794 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 S100ZQ8WXG8 99 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 TNFRSF18Q9Y5U5 241 aa11.5□□□□□ -0.57
SMN2-216ENST00000638794 FUSP35637 526 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMN2-216ENST00000638794 CYCSP99999 105 aaKnown RBP11.49□□□□□ -0.57
SMN2-216ENST00000638794 LYPD1Q8N2G4 141 aa11.49□□□□□ -0.57
SMN2-216ENST00000638794 ATP5SQ99766 215 aa11.49□□□□□ -0.57
SMN2-216ENST00000638794 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 K7EQD1 137 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 SFTA3P0C7M3 94 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 H2BFSP57053 126 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 TMEM183BQ1AE95 376 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 FFAR4Q5NUL3 377 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 Q6AWC8 147 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 NEGR1Q7Z3B1 354 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 TMEM183AQ8IXX5 376 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 PPP1R1CQ8WVI7 109 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 ZNF479Q96JC4 524 aa11.48□□□□□ -0.57
SMN2-216ENST00000638794 DIRC3C9JPN6 131 aa11.47□□□□□ -0.57
SMN2-216ENST00000638794 UPK1BO75841 260 aa11.47□□□□□ -0.57
SMN2-216ENST00000638794 ERVFC1-1P60608 527 aa11.47□□□□□ -0.57
SMN2-216ENST00000638794 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
SMN2-216ENST00000638794 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
SMN2-216ENST00000638794 RASL10AQ92737 203 aa11.47□□□□□ -0.57
SMN2-216ENST00000638794 INMT-MINDY4F8WBC2 141 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 EREGO14944 169 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMN2-216ENST00000638794 SRIP30626 198 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 IFITM3Q01628 133 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 FAM159AQ6UWV7 190 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 HYLS1Q96M11 299 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 SPXQ9BT56 116 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 PGPEP1Q9NXJ5 209 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 HSPB11Q9Y547 144 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 LENEPQ9Y5L5 61 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 LY96Q9Y6Y9 160 aa11.46□□□□□ -0.57
SMN2-216ENST00000638794 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
SMN2-216ENST00000638794 TAS2R45P59539 299 aa11.45□□□□□ -0.58
SMN2-216ENST00000638794 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
SMN2-216ENST00000638794 WFDC10BQ8IUB3 73 aa11.45□□□□□ -0.58
SMN2-216ENST00000638794 SMIM3Q9BZL3 60 aa11.45□□□□□ -0.58
SMN2-216ENST00000638794 NAGKQ9UJ70 344 aa11.45□□□□□ -0.58
SMN2-216ENST00000638794 TRAV9-2A0A087WT02 112 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 MPC2O95563 127 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 DNAH10OSP0CZ25 163 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 GYPEP15421 78 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 TDRG1Q3Y452 100 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 SCGB1C1Q8TD33 95 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
SMN2-216ENST00000638794 TMED6Q8WW62 240 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 OTORQ9NRC9 128 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 RPH3ALQ9UNE2 315 aa11.44□□□□□ -0.58
SMN2-216ENST00000638794 A0A087WTM6 91 aa11.43□□□□□ -0.58
SMN2-216ENST00000638794 IFNA5P01569 189 aa11.43□□□□□ -0.58
SMN2-216ENST00000638794 ORM1P02763 201 aa11.43□□□□□ -0.58
SMN2-216ENST00000638794 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
SMN2-216ENST00000638794 MARVELD1Q9BSK0 173 aa11.43□□□□□ -0.58
SMN2-216ENST00000638794 PTTG2Q9NZH5 202 aa11.43□□□□□ -0.58
SMN2-216ENST00000638794 HERC1Q15751 4861 aa11.43□□□□□ -0.58
SMN2-216ENST00000638794 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
SMN2-216ENST00000638794 PGPA6NDG6 321 aa11.42□□□□□ -0.58
SMN2-216ENST00000638794 SSNA1O43805 119 aa11.42□□□□□ -0.58
SMN2-216ENST00000638794 PET100P0DJ07 73 aa11.42□□□□□ -0.58
SMN2-216ENST00000638794 RPL12P30050 165 aaKnown RBP11.42□□□□□ -0.58
SMN2-216ENST00000638794 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
SMN2-216ENST00000638794 MSRB1Q9NZV6 116 aa11.42□□□□□ -0.58
SMN2-216ENST00000638794 MBD2Q9UBB5 411 aa11.42□□□□□ -0.58
SMN2-216ENST00000638794 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 C9JCJ5 164 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 M0R2P5 195 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 GNRH2O43555 120 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 EVI2AP22794 236 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 GOLT1AQ6ZVE7 132 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 OR4C5Q8NGB2 326 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 WFDC1Q9HC57 220 aa11.41□□□□□ -0.58
SMN2-216ENST00000638794 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 IGHV3-16A0A0C4DH30 117 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms