RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 RLFQ13129 1914 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 IGHV1-69DA0A0B4J2H0 117 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 IGHV1-69P01742 117 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 CDKN1BP46527 198 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 THSD7BQ9C0I4 1608 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 TSC2P49815 1807 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 PCP2Q8IVA1 136 aa14.65□□□□□ -0.06
SCARB2-213ENST00000638680 HLA-DMBP28068 263 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 KLF2Q9Y5W3 355 aaPredicted RBP14.64□□□□□ -0.07
SCARB2-213ENST00000638680 IGHV2-70DA0A0C4DH43 119 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 LINC01619G3V211 115 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 C20orf78Q9BR46 151 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 RNASE13Q5GAN3 156 aaKnown RBP14.64□□□□□ -0.07
SCARB2-213ENST00000638680 NUPR1O60356 82 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 IGLV1-44P01699 117 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 MSMBP08118 114 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 ZNF491Q8N8L2 437 aa14.64□□□□□ -0.07
SCARB2-213ENST00000638680 NXPH4O95158 308 aa14.63□□□□□ -0.07
SCARB2-213ENST00000638680 UNQ6494/PRO21346Q6UXR6 183 aa14.63□□□□□ -0.07
SCARB2-213ENST00000638680 PLA2G2EQ9NZK7 142 aa14.63□□□□□ -0.07
SCARB2-213ENST00000638680 GAGE6Q13070 117 aa14.63□□□□□ -0.07
SCARB2-213ENST00000638680 MYO7BQ6PIF6 2116 aa14.63□□□□□ -0.07
SCARB2-213ENST00000638680 EGR2P11161 476 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-213ENST00000638680 UBL5Q9BZL1 73 aa14.62□□□□□ -0.07
SCARB2-213ENST00000638680 POU2AF1Q16633 256 aa14.62□□□□□ -0.07
SCARB2-213ENST00000638680 TMEM243Q9BU79 118 aa14.62□□□□□ -0.07
SCARB2-213ENST00000638680 CFHR4Q92496 578 aa14.62□□□□□ -0.07
SCARB2-213ENST00000638680 DYNAPQ8N1N2 210 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 HEATR5AQ86XA9 2040 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 HELZP42694 1942 aaKnown RBP14.61□□□□□ -0.07
SCARB2-213ENST00000638680 COA6Q5JTJ3 125 aaKnown RBP14.61□□□□□ -0.07
SCARB2-213ENST00000638680 DEFB125Q8N687 156 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 HAMPP81172 84 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 NTN5Q8WTR8 489 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-213ENST00000638680 PRSS29PA6NIE9 313 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 GAGE7O76087 117 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 GAGE12FP0CL80 117 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 GAGE12GP0CL81 117 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 GAGE12IP0CL82 117 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 PSCAO43653 123 aa14.61□□□□□ -0.07
SCARB2-213ENST00000638680 PLXNA2O75051 1894 aa14.6□□□□□ -0.07
SCARB2-213ENST00000638680 ZNF561-AS1K7EIQ3 104 aa14.6□□□□□ -0.07
SCARB2-213ENST00000638680 TRACP01848 142 aa14.6□□□□□ -0.07
SCARB2-213ENST00000638680 TDRG1Q3Y452 100 aa14.6□□□□□ -0.07
SCARB2-213ENST00000638680 PI4KAP42356 2102 aa14.6□□□□□ -0.07
SCARB2-213ENST00000638680 PLXND1Q9Y4D7 1925 aa14.59□□□□□ -0.07
SCARB2-213ENST00000638680 TCTEX1D4Q5JR98 221 aa14.59□□□□□ -0.07
SCARB2-213ENST00000638680 SSC4DQ8WTU2 575 aa14.59□□□□□ -0.07
SCARB2-213ENST00000638680 CITED1Q99966 193 aa14.59□□□□□ -0.07
SCARB2-213ENST00000638680 RBMY1FQ15415 496 aaKnown RBP14.59□□□□□ -0.07
SCARB2-213ENST00000638680 CRLF1O75462 422 aa14.59□□□□□ -0.07
SCARB2-213ENST00000638680 MAPK1IP1LQ8NDC0 245 aa14.59□□□□□ -0.07
SCARB2-213ENST00000638680 RNF223E7ERA6 249 aa14.58□□□□□ -0.07
SCARB2-213ENST00000638680 GNRH2O43555 120 aa14.58□□□□□ -0.07
SCARB2-213ENST00000638680 FOXE3Q13461 319 aa14.58□□□□□ -0.07
SCARB2-213ENST00000638680 C15orf53Q8NAA6 179 aa14.58□□□□□ -0.07
SCARB2-213ENST00000638680 Q8NFD4 153 aa14.58□□□□□ -0.07
SCARB2-213ENST00000638680 CITED2Q99967 270 aaPredicted RBP14.58□□□□□ -0.07
SCARB2-213ENST00000638680 SCRT2Q9NQ03 307 aa14.58□□□□□ -0.07
SCARB2-213ENST00000638680 GATA1P15976 413 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-213ENST00000638680 TRAV13-2A0A0B4J235 113 aa14.58□□□□□ -0.08
SCARB2-213ENST00000638680 LINC00173Q6ZV60 143 aa14.58□□□□□ -0.08
SCARB2-213ENST00000638680 CEACAM8P31997 349 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-213ENST00000638680 NLRC5Q86WI3 1866 aa14.58□□□□□ -0.08
SCARB2-213ENST00000638680 IGHV7-4-1A0A0J9YVY3 117 aa14.58□□□□□ -0.08
SCARB2-213ENST00000638680 HERVK_113P63121 156 aa14.58□□□□□ -0.08
SCARB2-213ENST00000638680 ANKRD29Q8N6D5 301 aa14.58□□□□□ -0.08
SCARB2-213ENST00000638680 TINCRA0A1B0GVN0 87 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 GVINP1Q7Z2Y8 2422 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 TRAV12-1A0A0B4J245 112 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 F5H768 121 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 CFC1BP0CG36 223 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 CFC1P0CG37 223 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 SUMO4Q6EEV6 95 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 SPANXDQ9BXN6 97 aa14.57□□□□□ -0.08
SCARB2-213ENST00000638680 C11orf53Q8IXP5 236 aa14.56□□□□□ -0.08
SCARB2-213ENST00000638680 INTS1Q8N201 2190 aaKnown RBP14.56□□□□□ -0.08
SCARB2-213ENST00000638680 F6UB75 175 aa14.56□□□□□ -0.08
SCARB2-213ENST00000638680 FGF23Q9GZV9 251 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-213ENST00000638680 AGPAT4-IT1Q9H0P7 198 aa14.56□□□□□ -0.08
SCARB2-213ENST00000638680 GATA3P23771 443 aa14.56□□□□□ -0.08
SCARB2-213ENST00000638680 ZNF493Q6ZR52 646 aa14.56□□□□□ -0.08
SCARB2-213ENST00000638680 SPRY2O43597 315 aa14.55□□□□□ -0.08
SCARB2-213ENST00000638680 TMEM126AQ9H061 195 aa14.55□□□□□ -0.08
SCARB2-213ENST00000638680 TRAV25A0A0B4J276 109 aa14.55□□□□□ -0.08
SCARB2-213ENST00000638680 DAD1P61803 113 aa14.55□□□□□ -0.08
SCARB2-213ENST00000638680 POLEQ07864 2286 aa14.55□□□□□ -0.08
SCARB2-213ENST00000638680 RPL32P62910 135 aaKnown RBP14.55□□□□□ -0.08
SCARB2-213ENST00000638680 SH2D6Q7Z4S9 175 aa14.54□□□□□ -0.08
SCARB2-213ENST00000638680 DEFB121Q5J5C9 76 aa14.54□□□□□ -0.08
SCARB2-213ENST00000638680 CRYBA4P53673 196 aa14.54□□□□□ -0.08
SCARB2-213ENST00000638680 RS1O15537 224 aa14.54□□□□□ -0.08
SCARB2-213ENST00000638680 BOD1L2Q8IYS8 172 aa14.54□□□□□ -0.08
SCARB2-213ENST00000638680 TICRRQ7Z2Z1 1910 aa14.54□□□□□ -0.08
SCARB2-213ENST00000638680 SRSF2Q01130 221 aaKnown RBP14.54□□□□□ -0.08
SCARB2-213ENST00000638680 DSCR8Q96T75 97 aa14.54□□□□□ -0.08
SCARB2-213ENST00000638680 DOCK9Q9BZ29 2069 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 IGHG4P01861 327 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 IGLL5B9A064 214 aa14.53□□□□□ -0.08
SCARB2-213ENST00000638680 NKAPP1Q8N9T2 125 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms