RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 GPHA2Q96T91 129 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 WFDC6Q9BQY6 131 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 ARRDC1-AS1Q9H2J1 176 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 RPP21Q9H633 154 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 ESM1Q9NQ30 184 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 FAM30AQ9NZY2 134 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 HCSTQ9UBK5 93 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 R4GMQ9 66 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 U3KQK5 164 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 TRPM6Q9BX84 2022 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 SCN3AQ9NY46 2000 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 GTF3C1Q12789 2109 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 ARHGAP21Q5T5U3 1957 aa1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 NCOA6Q14686 2063 aaPredicted RBP1.94□□□□□ -2.1
SYNGAP1-221ENST00000637490 MGAMO43451 1857 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 A0A096LNJ9 63 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 TRAV12-1A0A0B4J245 112 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGHV3OR16-9A0A0B4J2B5 98 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGHV1OR15-9A0A0B4J2B8 117 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 LOC100131303A0A0U1RQF7 123 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 FAM223BA6NKX1 122 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 E7EQL1 145 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 H7C423 109 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGLV2-8P01709 118 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGHV3-33P01772 117 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 BGLAPP02818 100 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 PIRTP0C851 137 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 CFC1BP0CG36 223 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 CFC1P0CG37 223 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 S100A4P26447 101 aaKnown RBP1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 FUSP35637 526 aaKnown RBP eCLIP1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 EIF4EBP1Q13541 118 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 MRPL51Q4U2R6 128 aaKnown RBP1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 Q6ZR03 302 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 ZNF826PQ6ZT77 177 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 FAM19A3Q7Z5A8 133 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 VMO1Q7Z5L0 202 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 FAM223AQ8IWN6 122 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 DEFB106AQ8N104 65 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 UBALD1Q8TB05 177 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 SMCR5Q8TEV8 140 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 ARHGAP5-AS1Q96IT6 56 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 CYYR1Q96J86 154 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 HS3ST6Q96QI5 342 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 TIMM21Q9BVV7 248 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 Q9HAA7 133 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 ZNF355PQ9NSJ1 428 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 LINC00474Q9P2X8 69 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 COL18A1P39060 1754 aa1.93□□□□□ -2.1
SYNGAP1-221ENST00000637490 LRP4O75096 1905 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGLV3-32A0A0A0MS00 114 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGLV1-36A0A0B4J1U3 117 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGKV1D-43A0A0B4J1Z2 117 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 LOC389332A0A1B0GUA5 103 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 A0A1B0GUT8 65 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 A0A1B0GVT2 93 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 TMEM30CPA0ZSE6 113 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 KLLNB2CW77 178 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 PRYO14603 147 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 SH2D1AO60880 128 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 FSTL3O95633 263 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGKV1-5P01602 117 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 PRSS1P07477 247 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 CCL4P13236 92 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 CRIP2P52943 208 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 FXYD4P59646 89 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 FGF12P61328 243 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 BLCAPP62952 87 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 Q0VFX4 171 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 FHL1Q13642 323 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 LPAL2Q16609 132 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 NSUN5P1Q3KNT7 163 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 SPANXN5Q5MJ07 72 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 IER5LQ5T953 404 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 NOTCH2NLQ7Z3S9 236 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 ORMDL3Q8N138 153 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 DYNAPQ8N1N2 210 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 C20orf197Q8N268 126 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 MAPKAPK5-AS1Q8N8E1 139 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 PFN4Q8NHR9 129 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 WFDC5Q8TCV5 224 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 TMEM263Q8WUH6 116 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 C1orf147Q96MC9 270 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 PROK2Q9HC23 129 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 SPRR3Q9UBC9 169 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 DKK2Q9UBU2 259 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 UBE2D4Q9Y2X8 147 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 TIMM8BQ9Y5J9 83 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 DOCK11Q5JSL3 2073 aa1.92□□□□□ -2.1
SYNGAP1-221ENST00000637490 PHF3Q92576 2039 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGKV1D-17A0A075B6S4 117 aa1.91□□□□□ -2.1
SYNGAP1-221ENST00000637490 A0A087X002 238 aa1.91□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGKV6D-41A0A0C4DH26 115 aa1.91□□□□□ -2.1
SYNGAP1-221ENST00000637490 IGKV1-9A0A0C4DH69 117 aa1.91□□□□□ -2.1
SYNGAP1-221ENST00000637490 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-221ENST00000637490 TMEM223A0PJW6 202 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms