RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 KCNIP2Q9NS61 270 aa12.64□□□□□ -0.39
CLN6-220ENST00000637450 HHLA3Q9XRX5 114 aa12.64□□□□□ -0.39
CLN6-220ENST00000637450 NXPH4O95158 308 aa12.63□□□□□ -0.39
CLN6-220ENST00000637450 CRYBA4P53673 196 aa12.63□□□□□ -0.39
CLN6-220ENST00000637450 CYCSP99999 105 aaKnown RBP12.63□□□□□ -0.39
CLN6-220ENST00000637450 LRRC37A5PQ49AS3 106 aa12.63□□□□□ -0.39
CLN6-220ENST00000637450 LYPD1Q8N2G4 141 aa12.63□□□□□ -0.39
CLN6-220ENST00000637450 Q8TAT8 98 aa12.63□□□□□ -0.39
CLN6-220ENST00000637450 S100ZQ8WXG8 99 aa12.63□□□□□ -0.39
CLN6-220ENST00000637450 RBAKDNA6NC62 111 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 CSN1S1P47710 185 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 RANP62826 216 aaKnown RBP12.62□□□□□ -0.39
CLN6-220ENST00000637450 ZNF266Q14584 549 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 ENKURQ8TC29 256 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 C8orf49Q96NF6 230 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
CLN6-220ENST00000637450 OR7C2O60412 319 aa12.61□□□□□ -0.39
CLN6-220ENST00000637450 PRAF2O60831 178 aa12.61□□□□□ -0.39
CLN6-220ENST00000637450 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
CLN6-220ENST00000637450 MRPL23Q16540 153 aaKnown RBP12.61□□□□□ -0.39
CLN6-220ENST00000637450 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
CLN6-220ENST00000637450 MUC21Q5SSG8 566 aa12.6□□□□□ -0.39
CLN6-220ENST00000637450 ATP5SQ99766 215 aa12.6□□□□□ -0.39
CLN6-220ENST00000637450 H2BFSP57053 126 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 Q6AWC8 147 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 IQCF2Q8IXL9 164 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 RASL10AQ92737 203 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 PGPEP1Q9NXJ5 209 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 LENEPQ9Y5L5 61 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 TNFRSF18Q9Y5U5 241 aa12.59□□□□□ -0.39
CLN6-220ENST00000637450 DIRC3C9JPN6 131 aa12.58□□□□□ -0.4
CLN6-220ENST00000637450 INMT-MINDY4F8WBC2 141 aa12.58□□□□□ -0.4
CLN6-220ENST00000637450 UPK1BO75841 260 aa12.58□□□□□ -0.4
CLN6-220ENST00000637450 UBE2L3P68036 154 aaKnown RBP12.58□□□□□ -0.4
CLN6-220ENST00000637450 IFITM3Q01628 133 aa12.58□□□□□ -0.4
CLN6-220ENST00000637450 PPP1R1CQ8WVI7 109 aa12.58□□□□□ -0.4
CLN6-220ENST00000637450 SPXQ9BT56 116 aa12.58□□□□□ -0.4
CLN6-220ENST00000637450 TRGV4A0A0C4DH28 118 aa12.57□□□□□ -0.4
CLN6-220ENST00000637450 SFTA3P0C7M3 94 aa12.57□□□□□ -0.4
CLN6-220ENST00000637450 FFAR4Q5NUL3 377 aa12.57□□□□□ -0.4
CLN6-220ENST00000637450 OR10G4Q8NGN3 311 aa12.57□□□□□ -0.4
CLN6-220ENST00000637450 ZNF479Q96JC4 524 aa12.57□□□□□ -0.4
CLN6-220ENST00000637450 HSPB11Q9Y547 144 aa12.57□□□□□ -0.4
CLN6-220ENST00000637450 K7EQD1 137 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 TAS2R45P59539 299 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 TMEM183BQ1AE95 376 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 FAM159AQ6UWV7 190 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 NFE4Q86UQ8 179 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 TMEM183AQ8IXX5 376 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 TMED6Q8WW62 240 aa12.56□□□□□ -0.4
CLN6-220ENST00000637450 TRGV11A0A075B6L2 103 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 EREGO14944 169 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 MPC2O95563 127 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 ERVFC1-1P60608 527 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 SCGB1C1Q8TD33 95 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 MARVELD1Q9BSK0 173 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 LY96Q9Y6Y9 160 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 FAT1Q14517 4588 aa12.55□□□□□ -0.4
CLN6-220ENST00000637450 IFNA5P01569 189 aa12.54□□□□□ -0.4
CLN6-220ENST00000637450 GYPEP15421 78 aa12.54□□□□□ -0.4
CLN6-220ENST00000637450 RPL12P30050 165 aaKnown RBP12.54□□□□□ -0.4
CLN6-220ENST00000637450 SRIP30626 198 aa12.54□□□□□ -0.4
CLN6-220ENST00000637450 TDRG1Q3Y452 100 aa12.54□□□□□ -0.4
CLN6-220ENST00000637450 HYLS1Q96M11 299 aa12.54□□□□□ -0.4
CLN6-220ENST00000637450 OTORQ9NRC9 128 aa12.54□□□□□ -0.4
CLN6-220ENST00000637450 HERC1Q15751 4861 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 PGPA6NDG6 321 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 K7EP13 123 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 EIF3GO75821 320 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLN6-220ENST00000637450 ORM1P02763 201 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 PET100P0DJ07 73 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 FUSP35637 526 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLN6-220ENST00000637450 CDPF1Q6NVV7 123 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 SMIM3Q9BZL3 60 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
CLN6-220ENST00000637450 GNRH2O43555 120 aa12.52□□□□□ -0.41
CLN6-220ENST00000637450 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
CLN6-220ENST00000637450 PCNPQ8WW12 178 aaKnown RBP12.52□□□□□ -0.41
CLN6-220ENST00000637450 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 SSNA1O43805 119 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 ARL6IP6Q8N6S5 226 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 OR4C5Q8NGB2 326 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 CMTM2Q8TAZ6 248 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 PTTG2Q9NZH5 202 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
CLN6-220ENST00000637450 A0A087WTM6 91 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 IGHV3-16A0A0C4DH30 117 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 M0R2P5 195 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 DNAH10OSP0CZ25 163 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 EVI2AP22794 236 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 PQLC2Q6ZP29 291 aa12.5□□□□□ -0.41
CLN6-220ENST00000637450 GOLT1AQ6ZVE7 132 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms