RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	JKAMP	Q9P055	326 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033		A0A1W2PPM0	123 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033		K7EP34	96 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033		Q6AWC8	147 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033	GLMP	Q8WWB7	406 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033	HIF1AN	Q9NWT6	349 aa		10.09	□□□□□ -0.79
CHRNA7-223	ENST00000637033	ZNF562	Q6V9R5	426 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	VMO1	Q7Z5L0	202 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	TMEM219	Q86XT9	240 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	LYPD1	Q8N2G4	141 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	FABP5P3	A8MUU1	101 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	FABP2	P12104	132 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	ODF1	Q14990	250 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	UFSP1	Q6NVU6	142 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	CHAC1	Q9BUX1	264 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	HIVEP3	Q5T1R4	2406 aa		10.08	□□□□□ -0.8
CHRNA7-223	ENST00000637033	IGKV3D-20	A0A0C4DH25	116 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	TEX48	A0A1B0GUV7	120 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033		M0R381	172 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	SMIM13	P0DJ93	91 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	EMP1	P54849	157 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	GTSF1L	Q9H1H1	148 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	TRBV25-1	A0A075B6N4	114 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033		H3BVH4	76 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	SMIM17	P0DL12	118 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	ZFP36	P26651	326 aa	Known RBP	10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	BMI1	P35226	326 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	RPL11	P62913	178 aa	Known RBP	10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	NEGR1	Q7Z3B1	354 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	RAB1B	Q9H0U4	201 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	HHLA3	Q9XRX5	114 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033		A0A1B0GW15	77 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	IGKC	P01834	107 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	PAX8	Q06710	450 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	SPANXN1	Q5VSR9	72 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	SH2D6	Q7Z4S9	175 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033	AGPAT4-IT1	Q9H0P7	198 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033		U3KQK5	164 aa		10.07	□□□□□ -0.8
CHRNA7-223	ENST00000637033		H3BMG7	143 aa		10.06	□□□□□ -0.8
CHRNA7-223	ENST00000637033	IGHV7-81	A0A0B4J1V7	117 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	IGLC6	P0CF74	106 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	CEACAM3	P40198	252 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	ATP6V0E1	O15342	81 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	PAX2	Q02962	417 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	WFDC2	Q14508	124 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	NPFFR1	Q9GZQ6	430 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	SRD5A1	P18405	259 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	PDE6H	Q13956	83 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	OR9G4	Q8NGQ1	327 aa		10.05	□□□□□ -0.8
CHRNA7-223	ENST00000637033	SMAGP	Q0VAQ4	97 aa		10.04	□□□□□ -0.8
CHRNA7-223	ENST00000637033	ARL6IP6	Q8N6S5	226 aa		10.04	□□□□□ -0.8
CHRNA7-223	ENST00000637033	OR4X2	Q8NGF9	303 aa		10.04	□□□□□ -0.8
CHRNA7-223	ENST00000637033	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.04	□□□□□ -0.8
CHRNA7-223	ENST00000637033		F6UB75	175 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	TGFA	P01135	160 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	TIMD4	Q96H15	378 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	HIST1H4G	Q99525	98 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	TRBV6-1	A0A0K0K1D8	114 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	TMEM238	C9JI98	176 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033		G3V4G9	280 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	S100A7A	Q86SG5	101 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	MGP	P08493	103 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	ETDB	Q3ZM63	59 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	CYSLTR1	Q9Y271	337 aa		10.03	□□□□□ -0.8
CHRNA7-223	ENST00000637033	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	DPM2	O94777	84 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	PRR9	Q5T870	116 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	MYOZ3	Q8TDC0	251 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	RPL39L	Q96EH5	51 aa	Known RBP	10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	USP9Y	O00507	2555 aa	Predicted RBP	10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	BUB3	O43684	328 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	IGHV3-11	P01762	117 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	TMEM78	Q5T7P6	136 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	C14orf178	Q8N769	122 aa	Predicted RBP	10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	GATD1	Q8NB37	220 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	NPB	Q8NG41	125 aa		10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	UTP20	O75691	2785 aa	Known RBP	10.02	□□□□□ -0.81
CHRNA7-223	ENST00000637033	POLQ	O75417	2590 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	TTC9C	Q8N5M4	171 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	UBTD1	Q9HAC8	227 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	PRTN3	P24158	256 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	OR11H6	Q8NGC7	330 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	INSL3	P51460	131 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033		Q8N9W7	124 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	C16orf92	Q96LL3	132 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	MSRB2	Q9Y3D2	182 aa		10.01	□□□□□ -0.81
CHRNA7-223	ENST00000637033	S100A4	P26447	101 aa	Known RBP	10	□□□□□ -0.81
CHRNA7-223	ENST00000637033	RNF5	Q99942	180 aa		10	□□□□□ -0.81
CHRNA7-223	ENST00000637033	TRBV12-3	P01733	135 aa		10	□□□□□ -0.81
CHRNA7-223	ENST00000637033	RPS20	P60866	119 aa	Known RBP	9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	SCGB2A2	Q13296	93 aa		9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	C8orf86	Q6ZUL3	223 aa		9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	LY6G5B	Q8NDX9	201 aa		9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	CCDC140	Q96MF4	163 aa		9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	NXT2	Q9NPJ8	142 aa	Known RBP	9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033		A0A1W2PPR1	153 aa		9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	VKORC1	Q9BQB6	163 aa		9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	TSSC4	Q9Y5U2	329 aa	Predicted RBP	9.99	□□□□□ -0.81
CHRNA7-223	ENST00000637033	TRAV8-2	A0A0B4J237	113 aa		9.99	□□□□□ -0.81

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