RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 SMIM15Q7Z3B0 74 aa12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 GLMPQ8WWB7 406 aa12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV7-4-1A0A0J9YVY3 117 aa12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 PRSS47A8MTI9 375 aa12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 ZNF207O43670 478 aaKnown RBP12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 PPIFP30405 207 aaKnown RBP12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 Q8N8P6 123 aa12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 COL25A1Q9BXS0 654 aaPredicted RBP12.3□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV3-49A0A0A0MS15 119 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV1-69DA0A0B4J2H0 117 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 SNAI2O43623 268 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV1-69P01742 117 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 FOXE3Q13461 319 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 LY6DQ14210 128 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 TMEM219Q86XT9 240 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 PEF1Q9UBV8 284 aaKnown RBP12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
CHRNA7-221ENST00000636898 IGLV2-18A0A075B6J9 118 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 BRI3O95415 125 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 C16orf92Q96LL3 132 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 A1L4Q6 167 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 IGHV4-39P01824 125 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 OR4X2Q8NGF9 303 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 MEGF9Q9H1U4 602 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 DKK2Q9UBU2 259 aa12.28□□□□□ -0.44
CHRNA7-221ENST00000636898 TRGV3P03979 118 aa12.27□□□□□ -0.45
CHRNA7-221ENST00000636898 IGF1P05019 195 aa12.27□□□□□ -0.45
CHRNA7-221ENST00000636898 EVI2AP22794 236 aa12.27□□□□□ -0.45
CHRNA7-221ENST00000636898 ARL3P36405 182 aa12.27□□□□□ -0.45
CHRNA7-221ENST00000636898 HSD52Q0P140 79 aa12.27□□□□□ -0.45
CHRNA7-221ENST00000636898 ODF1Q14990 250 aa12.27□□□□□ -0.45
CHRNA7-221ENST00000636898 C7orf71A4D174 169 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 CBY3A6NI87 242 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 C19orf84I3L1E1 186 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 C18orf15Q96N68 181 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 SMPXQ9UHP9 88 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 A6NDN8 102 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 H3BUA1 57 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 NDUFA4O00483 81 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 GATA1P15976 413 aaPredicted RBP12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 NRACQ8N912 160 aa12.26□□□□□ -0.45
CHRNA7-221ENST00000636898 ATP5LO75964 103 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 AMMECR1LQ6DCA0 310 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 ADAMTSL5Q6ZMM2 481 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 WFDC3Q8IUB2 231 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 TMEM158Q8WZ71 300 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 LINC00477Q96M19 166 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 PRORYQ9H606 182 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 SPANXN1Q5VSR9 72 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 ERASQ7Z444 233 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 RNASE8Q8TDE3 154 aaKnown RBP12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 USMG5Q96IX5 58 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 HHLA3Q9XRX5 114 aa12.25□□□□□ -0.45
CHRNA7-221ENST00000636898 PIMREGQ9BSJ6 248 aa12.24□□□□□ -0.45
CHRNA7-221ENST00000636898 H3BRM9 83 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 OVOL1O14753 267 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 PRSS1P07477 247 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 NMUP48645 174 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 PCP2Q8IVA1 136 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 MRAP2Q96G30 205 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 C20orf173Q96LM9 149 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 LINC00527Q9UJ94 153 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 ABCA2Q9BZC7 2435 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 IGHV3OR16-10A0A075B7F0 116 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 TRAV40A0A0B4J280 105 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 SOCS3O14543 225 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 UQCRFS1P47985 274 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 LAGE3Q14657 143 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 UNQ9165/PRO28630Q6UXU0 137 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 GPHB5Q86YW7 130 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 UFC1Q9Y3C8 167 aa12.23□□□□□ -0.45
CHRNA7-221ENST00000636898 IGKCP01834 107 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 IGHG2P01859 326 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 SMIM17P0DL12 118 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 PRR9Q5T870 116 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 BRD3OSQ6XYD6 125 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 OR10J6PQ8NGY7 276 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 RBX1P62877 108 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 ZFAND2AQ8N6M9 145 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 HIGD1BQ9P298 99 aa12.22□□□□□ -0.45
CHRNA7-221ENST00000636898 SPTBN4Q9H254 2564 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 IGHV4-61A0A0C4DH41 118 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 H3BVH4 76 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 NDUFS8O00217 210 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 DPM2O94777 84 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 GNLYP22749 145 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 SRSF1Q07955 248 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 Q6ZQT7 251 aa12.21□□□□□ -0.45
CHRNA7-221ENST00000636898 AKAP6Q13023 2319 aa12.21□□□□□ -0.46
CHRNA7-221ENST00000636898 C9orf118A6NHY6 69 aa12.2□□□□□ -0.46
CHRNA7-221ENST00000636898 TRBV12-3P01733 135 aa12.2□□□□□ -0.46
CHRNA7-221ENST00000636898 HLA-DRB4P13762 266 aa12.2□□□□□ -0.46
CHRNA7-221ENST00000636898 MYOZ3Q8TDC0 251 aa12.2□□□□□ -0.46
CHRNA7-221ENST00000636898 C10orf105Q8TEF2 133 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms