RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
SCN2A-213ENST00000636769 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
SCN2A-213ENST00000636769 PRR19A6NJB7 356 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 E9PLN8 166 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 PFN2P35080 140 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 LRRC75A-AS1Q8N1F1 130 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 FAM240AA0A1B0GVK7 77 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 ZNF134P52741 427 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 LINC00205P59089 165 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 NDPQ00604 133 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 Q6ZSR3 168 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 TMEM219Q86XT9 240 aa4.84□□□□□ -1.64
SCN2A-213ENST00000636769 DOCK5Q9H7D0 1870 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 FUSP35637 526 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCN2A-213ENST00000636769 LTBRP36941 435 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 ZNF672Q499Z4 452 aaPredicted RBP4.83□□□□□ -1.64
SCN2A-213ENST00000636769 SPRR3Q9UBC9 169 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 SVILO95425 2214 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.83□□□□□ -1.64
SCN2A-213ENST00000636769 CTRLP40313 264 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 NDUFA11Q86Y39 141 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 CASP8AP2Q9UKL3 1982 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 ODF1Q14990 250 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 WDR90Q96KV7 1748 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 EPOPA6NHQ4 379 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 LGALS9O00182 355 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 MT-ATP8P03928 68 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 DSCR9P59020 149 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 Q9H8V8 135 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 ESPL1Q14674 2120 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 CXCL5P42830 114 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 LYPD6Q86Y78 171 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 NYNRINQ9P2P1 1898 aaKnown RBP4.83□□□□□ -1.64
SCN2A-213ENST00000636769 LTBP1Q14766 1721 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 FAM236DA0A1B0GTK5 79 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 PINLYPA6NC86 204 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 DKK1O94907 266 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 FAM236CP0DP71 79 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 MED14OSP0DP75 135 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 ZNF491Q8N8L2 437 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 C11orf44Q8N8P7 122 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 PTH2Q96A98 100 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 RALGAPA1Q6GYQ0 2036 aa4.83□□□□□ -1.64
SCN2A-213ENST00000636769 GP9P14770 177 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 ARTNQ5T4W7 220 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 DYNAPQ8N1N2 210 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 TOMM6Q96B49 74 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 OPRPNQ99935 248 aaPredicted RBP4.82□□□□□ -1.64
SCN2A-213ENST00000636769 SIPA1L1O43166 1804 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 MPDZO75970 2070 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 NDUFA7O95182 113 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 HTN3P15516 51 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 C17orf58Q2M2W7 97 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 Q8N1Y9 231 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 ATP1A1-AS1Q5TC04 95 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 MTCL1Q9Y4B5 1905 aaKnown RBP4.82□□□□□ -1.64
SCN2A-213ENST00000636769 MBD3L4A6NDZ8 208 aaPredicted RBP4.82□□□□□ -1.64
SCN2A-213ENST00000636769 MBD3L3A6NE82 208 aaPredicted RBP4.82□□□□□ -1.64
SCN2A-213ENST00000636769 MBD3L5A6NJ08 208 aaPredicted RBP4.82□□□□□ -1.64
SCN2A-213ENST00000636769 ZNF561-AS1K7EIQ3 104 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 MBD3L2Q8NHZ7 208 aaPredicted RBP4.82□□□□□ -1.64
SCN2A-213ENST00000636769 IGKV3D-7A0A0C4DH55 119 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 NDUFC1O43677 76 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 YPEL4Q96NS1 127 aa4.82□□□□□ -1.64
SCN2A-213ENST00000636769 PLXNB2O15031 1838 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 A0A1B0GXF2 115 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 TEX36Q5VZQ5 186 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 PARP14Q460N5 1801 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 OVOL3O00110 214 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 Q6Q795 121 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 IGHV1-69P01742 117 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 C11orf1Q9H5F2 150 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 TRAV25A0A0B4J276 109 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 H3BUA1 57 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 PTPRZ1P23471 2315 aaPredicted RBP4.81□□□□□ -1.64
SCN2A-213ENST00000636769 WFDC9Q8NEX5 89 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 APC2O95996 2303 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 CRYGCP07315 174 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 RNF152Q8N8N0 203 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 C20orf173Q96LM9 149 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 AGPAT4-IT1Q9H0P7 198 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 SND1-IT1Q9HBX3 110 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 MSRB2Q9Y3D2 182 aa4.81□□□□□ -1.64
SCN2A-213ENST00000636769 DOCK11Q5JSL3 2073 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 TCL1BO95988 128 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 ZNRF2Q8NHG8 242 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 SCN10AQ9Y5Y9 1956 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 UBE2E1P51965 193 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 PIP4P2Q8N4L2 257 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 P0DMU3 169 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 FAM231AP0DMU4 169 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 FAM231CP0DMU5 169 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 DEFB104AQ8WTQ1 72 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 TMEM256-PLSCR3K7ERE1 68 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 RSPO1Q2MKA7 263 aaPredicted RBP4.8□□□□□ -1.64
SCN2A-213ENST00000636769 MDS2Q8NDY4 140 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 PLXNA1Q9UIW2 1896 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms