RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 IGHV3-11P01762 117 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 FGF6P10767 208 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 S100A7AQ86SG5 101 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 DTX2Q86UW9 622 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 FOXC2Q99958 501 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 TLN2Q9Y4G6 2542 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 IGKV3D-20A0A0C4DH25 116 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 TRBV6-1A0A0K0K1D8 114 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 BUB3O43684 328 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 LY6EQ16553 131 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 TMEM158Q8WZ71 300 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 CST9LQ9H4G1 147 aa10.82□□□□□ -0.68
CACNA1A-228ENST00000636610 USP9XQ93008 2570 aaPredicted RBP10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 A0A1B0GW15 77 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 SAP30O75446 220 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 MAP1LC3AQ9H492 121 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 TMEM160Q9NX00 188 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 CFAP46Q8IYW2 2715 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 A1L4Q6 167 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 SRD5A1P18405 259 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 GCSHP23434 173 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 JMJD8Q96S16 334 aa10.81□□□□□ -0.68
CACNA1A-228ENST00000636610 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 H3BVH4 76 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 CD5LO43866 347 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 TRBV12-3P01733 135 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 C11orf71Q6IPW1 123 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 ZNF502Q8TBZ5 544 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 SETD2Q9BYW2 2564 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 PKD1L2Q7Z442 2459 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 ABCA2Q9BZC7 2435 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 K7ERJ3 54 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 EFNA4P52798 201 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 KIR3DS1Q14943 382 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 Q8N6K4 173 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 HIF1ANQ9NWT6 349 aa10.8□□□□□ -0.68
CACNA1A-228ENST00000636610 GOSR1O95249 250 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 SVIPQ8NHG7 77 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 CLPSL1A2RUU4 121 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 M0R381 172 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 SMAD7O15105 426 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 SPANXN1Q5VSR9 72 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 ZFAND3Q9H8U3 227 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 U3KQK5 164 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 AGRNO00468 2067 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 F6UB75 175 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 TMEM78Q5T7P6 136 aa10.79□□□□□ -0.68
CACNA1A-228ENST00000636610 LGALS9BQ3B8N2 356 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 LGALS9CQ6DKI2 356 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 C16orf92Q96LL3 132 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 PPP1R14DQ9NXH3 145 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 TRAV40A0A0B4J280 105 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 OCIAD2Q56VL3 154 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 PRR9Q5T870 116 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 C8orf86Q6ZUL3 223 aa10.78□□□□□ -0.68
CACNA1A-228ENST00000636610 MYO9AB2RTY4 2548 aa10.77□□□□□ -0.68
CACNA1A-228ENST00000636610 TRAV8-2A0A0B4J237 113 aa10.77□□□□□ -0.69
CACNA1A-228ENST00000636610 SCGB2A1O75556 95 aa10.77□□□□□ -0.69
CACNA1A-228ENST00000636610 FCER1GP30273 86 aa10.77□□□□□ -0.69
CACNA1A-228ENST00000636610 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
CACNA1A-228ENST00000636610 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
CACNA1A-228ENST00000636610 PAX8Q06710 450 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 KLRB1Q12918 225 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 ZC2HC1BQ5TFG8 222 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 TMEM8BA6NDV4 472 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 FBXL19-AS1Q494R0 122 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 AJUBAQ96IF1 538 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 METTL26Q96S19 204 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 A0A0G2JLM5 398 aa10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 FAM110DQ8TAY7 271 aaPredicted RBP10.76□□□□□ -0.69
CACNA1A-228ENST00000636610 SMIM17P0DL12 118 aa10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 FXYD2P54710 66 aa10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 RPS20P60866 119 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 OR2K2Q8NGT1 345 aa10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 C19orf84I3L1E1 186 aa10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 NEGR1Q7Z3B1 354 aa10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-228ENST00000636610 ODF1Q14990 250 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 MINOS1Q5TGZ0 78 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 MINOS1-NBL1R4GNA1 71 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 CENPVL3A0A0U1RRI6 287 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 UBE2E1P51965 193 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 ADAMTSL5Q6ZMM2 481 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 MTURNQ8N3F0 131 aa10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 ZNF48Q96MX3 618 aaPredicted RBP10.74□□□□□ -0.69
CACNA1A-228ENST00000636610 ABCA12Q86UK0 2595 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 A6NDN8 102 aa10.73□□□□□ -0.69
CACNA1A-228ENST00000636610 NPFFO15130 113 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms