RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 NUPR1O60356 82 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 SERF1AO75920 110 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 HIST1H1EP10412 219 aaKnown RBP10.84□□□□□ -0.67
LINC00339-208ENST00000634934 RAB4AP20338 218 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 Q6ZWC4 215 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 FXYD5Q96DB9 178 aa10.84□□□□□ -0.67
LINC00339-208ENST00000634934 TRBV6-1A0A0K0K1D8 114 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 FAM231BA6NCW3 169 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 G3V4G9 280 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 PEX7O00628 323 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 GPX1P07203 203 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 IGLC2P0DOY2 106 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 KCNS1Q96KK3 526 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 C17orf77Q96MU5 243 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-208ENST00000634934 ZNF586Q9NXT0 402 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 ZNF492Q9P255 531 aa10.83□□□□□ -0.68
LINC00339-208ENST00000634934 A0A087X0K7 114 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 M0R143 59 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 WIPF1O43516 503 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 NBEAP1P0C6P0 100 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 FAM162BQ5T6X4 162 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 BAGE3Q86Y29 109 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 BAGE2Q86Y30 109 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 OR4B1Q8NGF8 309 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 C16orf92Q96LL3 132 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 NAT8BQ9UHF3 227 aa10.82□□□□□ -0.68
LINC00339-208ENST00000634934 TRBV19A0A075B6N1 114 aa10.81□□□□□ -0.68
LINC00339-208ENST00000634934 OR4C46A6NHA9 309 aa10.81□□□□□ -0.68
LINC00339-208ENST00000634934 NUTF2P61970 127 aaKnown RBP10.81□□□□□ -0.68
LINC00339-208ENST00000634934 OR5I1Q13606 314 aa10.81□□□□□ -0.68
LINC00339-208ENST00000634934 MIEN1Q9BRT3 115 aa10.81□□□□□ -0.68
LINC00339-208ENST00000634934 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
LINC00339-208ENST00000634934 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
LINC00339-208ENST00000634934 K7EQG2 157 aa10.8□□□□□ -0.68
LINC00339-208ENST00000634934 IGFL4Q6B9Z1 124 aa10.8□□□□□ -0.68
LINC00339-208ENST00000634934 DCANP1Q8TF63 244 aa10.8□□□□□ -0.68
LINC00339-208ENST00000634934 TSKUQ8WUA8 353 aa10.8□□□□□ -0.68
LINC00339-208ENST00000634934 RNASE7Q9H1E1 156 aaKnown RBP10.8□□□□□ -0.68
LINC00339-208ENST00000634934 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-208ENST00000634934 TRAV2A0A0B4J234 112 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 A0A1B0GV90 55 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 GRIFINA4D1Z8 144 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 ID1P41134 155 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 SAMD5Q5TGI4 173 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 C5orf17Q8NAS9 161 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 FMC1Q96HJ9 113 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 A0A1B0GXF2 115 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 SOCS3O14543 225 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-208ENST00000634934 APCSP02743 223 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 ZNF688P0C7X2 276 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 SNRPD3P62318 126 aaKnown RBP10.79□□□□□ -0.68
LINC00339-208ENST00000634934 PDE6HQ13956 83 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 RNF182Q8N6D2 247 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 NEU1Q99519 415 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 SLC50A1Q9BRV3 221 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 ATG101Q9BSB4 218 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
LINC00339-208ENST00000634934 ZNF256Q9Y2P7 627 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-208ENST00000634934 TRAV8-2A0A0B4J237 113 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 C20orf202A1L168 122 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 ZNF253O75346 499 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 PSG9Q00887 426 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 BEAN1Q3B7T3 259 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 PSMG4Q5JS54 123 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 Q8N976 141 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 DNAH3Q8TD57 4116 aa10.78□□□□□ -0.68
LINC00339-208ENST00000634934 CD7P09564 240 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 HLA-DMBP28068 263 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 EGFEM1PQ0D2K5 195 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 GTSCR1Q86UQ5 136 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 EXOC3-AS1Q8N2X6 119 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 NUDT10Q8NFP7 164 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 NUDT11Q96G61 164 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 PRR25Q96S07 402 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 VAMP8Q9BV40 100 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 SNHG12Q9BXW3 62 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 AAMDCQ9H7C9 122 aa10.77□□□□□ -0.69
LINC00339-208ENST00000634934 SORL1Q92673 2214 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 ZNF705FA8MVS1 300 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-208ENST00000634934 NPIPB6E9PJ23 425 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 LTAP01374 205 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 ZNF705DP0CH99 300 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-208ENST00000634934 ZNF705BP0CI00 300 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-208ENST00000634934 CTRLP40313 264 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 ARL6IP6Q8N6S5 226 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 C20orf173Q96LM9 149 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 Q9H3A6 140 aa10.76□□□□□ -0.69
LINC00339-208ENST00000634934 A8MWL6 223 aa10.75□□□□□ -0.69
LINC00339-208ENST00000634934 PRB2P02812 416 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-208ENST00000634934 PRB4P10163 310 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms