RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 FAM240AA0A1B0GVK7 77 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 A0A1B0GW15 77 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 TRDV1A0A1B0GX56 115 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 OR2T8A6NH00 312 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 OR4C46A6NHA9 309 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 UPK2O00526 184 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 DENRO43583 198 aaKnown RBP1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 MED6O75586 246 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ARL6IP5O75915 188 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 DHFRP00374 187 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 HRASP01112 189 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 PPYP01298 95 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 IGKV1-39P01597 117 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 IGKV1-17P01599 117 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 IGKV1D-39P04432 117 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 CTSDP07339 412 aaPredicted RBP1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 PTHLHP12272 177 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 MIFP14174 115 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 NQO2P16083 231 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 CRYBB3P26998 211 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 HLA-DMBP28068 263 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 GALR1P47211 349 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 MED21Q13503 144 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAM1Q15629 374 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 C12orf74Q32Q52 190 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 C6orf99Q4VX62 202 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 RNASE13Q5GAN3 156 aaKnown RBP1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ACTL10Q5JWF8 245 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF705AQ6ZN79 300 aaPredicted RBP1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF818PQ6ZRF7 136 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 FAM19A1Q7Z5A9 133 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 C8orf59Q8N0T1 100 aaPredicted RBP1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 LGI3Q8N145 548 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF709Q8N972 641 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF555Q8NEP9 628 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 OR1P1Q8NH06 330 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ENKURQ8TC29 256 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 LSM10Q969L4 123 aaKnown RBP1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 TMEM203Q969S6 136 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 C20orf144Q9BQM9 153 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 GINS4Q9BRT9 223 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 MS4A6AQ9H2W1 248 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 VCXQ9H320 206 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 ACOT13Q9NPJ3 140 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 RHBDL2Q9NX52 303 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 C21orf62Q9NYP8 219 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 TAS2R8Q9NYW2 309 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 MRPL36Q9P0J6 103 aaKnown RBP1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 KLK12Q9UKR0 248 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 PRELID3BQ9Y3B1 194 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 RNF213Q63HN8 5207 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 A0A0A6YYH2 397 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAV10A0A0B4J240 114 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAV8-6A0A0B4J262 113 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 TEX50A0A1B0GTY4 177 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 A6NJ64 397 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 IGLL5B9A064 214 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 SULT1C2O00338 296 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 DEFB4AO15263 64 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 IGKV1-5P01602 117 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 IGLV2-8P01709 118 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 CD5P06127 495 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 CTXN2P0C2S0 81 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 P0DMU3 169 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 FAM231AP0DMU4 169 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 FAM231CP0DMU5 169 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 OR13C7P0DN81 318 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 HLA-DRB4P13762 266 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 GADD45AP24522 165 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 OPRK1P41145 380 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 RANBP1P43487 201 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 PSMD7P51665 324 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 AQP4P55087 323 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 PRCDQ00LT1 54 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 CDNFQ49AH0 187 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 AADACL3Q5VUY0 350 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 LAMTOR1Q6IAA8 161 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 SFXN4Q6P4A7 337 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 TOMM20LQ6UXN7 152 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 Q6ZRN7 208 aaPredicted RBP1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 TMEM256Q8N2U0 113 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 BPIFB6Q8NFQ5 453 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 OR1L8Q8NGR8 309 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNRF2Q8NHG8 242 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 CIRBP-AS1Q8TBR5 109 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 MGLLQ99685 303 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 RHPN1-AS1Q9BWJ2 59 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 WFDC1Q9HC57 220 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 YTHDF2Q9Y5A9 579 aaKnown RBP1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 HLA-DRB4X5D2U9 266 aa1.49□□□□□ -2.17
SMARCB1-208ENST00000634926 DEFB131BA0A096LNP1 70 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 IGHV3-49A0A0A0MS15 119 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAV14DV4A0A0A6YYC5 116 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 IGHV6-1A0A0B4J1U7 121 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 IGHV3-21A0A0B4J1V1 117 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 KNCNA6PVL3 124 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 H3BMM0 161 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 PDCD5O14737 125 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 NDUFS5O43920 106 aa1.48□□□□□ -2.17
SMARCB1-208ENST00000634926 MRPS14O60783 128 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms