RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 S100A5P33763 92 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 TMEM183BQ1AE95 376 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 TRIQKQ629K1 86 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 TMEM183AQ8IXX5 376 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 Q8N3U1 123 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 PFDN5Q99471 154 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 Q9HAA7 133 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 UBR4Q5T4S7 5183 aa8.6□□□□□ -1.03
LINC00339-206ENST00000634451 NAP1L6A6NFF2 107 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 CCDC160A6NGH7 325 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 EVI2AP22794 236 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 INPP1P49441 399 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 S100A10P60903 97 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 RAB31Q13636 194 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 TMEM78Q5T7P6 136 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 TMEM252Q8N6L7 170 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 THAP6Q8TBB0 222 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 FXYD5Q96DB9 178 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 C20orf85Q9H1P6 137 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 PRELID1Q9Y255 219 aa8.59□□□□□ -1.03
LINC00339-206ENST00000634451 TRAV6A0A075B6T7 132 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 PLA2G10O15496 165 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 ZNF138P52744 262 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 RAB32Q13637 225 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 PDE6HQ13956 83 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 Q8N814 137 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 OR10G4Q8NGN3 311 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 TMEM70Q9BUB7 260 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 NPCDR1Q9BY65 106 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 RBM38Q9H0Z9 239 aaKnown RBP8.58□□□□□ -1.04
LINC00339-206ENST00000634451 NAGKQ9UJ70 344 aa8.58□□□□□ -1.04
LINC00339-206ENST00000634451 C5orf51A6NDU8 294 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 GNRH2O43555 120 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 IGHV3-30P01768 117 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 IGHV3-33P01772 117 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 NMBP08949 121 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 IGHV3-30-3P0DP02 117 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 IGHV3-30-5P0DP03 117 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 IL7P13232 177 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 SULT1A1P50225 295 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 SLAQ13239 276 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 IL15RAQ13261 267 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 ZNF846Q147U1 533 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 LINC01620Q4KN68 170 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 SPANXN2Q5MJ10 180 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 PCNPQ8WW12 178 aaKnown RBP8.57□□□□□ -1.04
LINC00339-206ENST00000634451 RASL10AQ92737 203 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 SLC25A31Q9H0C2 315 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 AAMDCQ9H7C9 122 aa8.57□□□□□ -1.04
LINC00339-206ENST00000634451 GPN1Q9HCN4 374 aaPredicted RBP8.57□□□□□ -1.04
LINC00339-206ENST00000634451 LYRM2Q9NU23 88 aaPredicted RBP8.57□□□□□ -1.04
LINC00339-206ENST00000634451 PSCAO43653 123 aa8.56□□□□□ -1.04
LINC00339-206ENST00000634451 NBEAP1P0C6P0 100 aa8.56□□□□□ -1.04
LINC00339-206ENST00000634451 ZNF266Q14584 549 aa8.56□□□□□ -1.04
LINC00339-206ENST00000634451 IQCF2Q8IXL9 164 aa8.56□□□□□ -1.04
LINC00339-206ENST00000634451 C12orf45Q8N5I9 185 aaPredicted RBP8.56□□□□□ -1.04
LINC00339-206ENST00000634451 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 LECT2O14960 151 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 NHLH2Q02577 135 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 CHAC2Q8WUX2 184 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 C2orf50Q96LR7 162 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 OR51M1Q9H341 326 aa8.55□□□□□ -1.04
LINC00339-206ENST00000634451 TRAV4A0A0B4J268 109 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 IBA57-AS1B1ANH7 110 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 F6UZH7 168 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 S100A11P31949 105 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 PPT1P50897 306 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 RANP62826 216 aaKnown RBP8.54□□□□□ -1.04
LINC00339-206ENST00000634451 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 Q6AWC8 147 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 DPPA3Q6W0C5 159 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 OR4C5Q8NGB2 326 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 NTN5Q8WTR8 489 aaPredicted RBP8.54□□□□□ -1.04
LINC00339-206ENST00000634451 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
LINC00339-206ENST00000634451 IGHV3-73A0A0B4J1V6 119 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
LINC00339-206ENST00000634451 C9JCJ5 164 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 ORM1P02763 201 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 TCRBP04435 133 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 GATA1P15976 413 aaPredicted RBP8.53□□□□□ -1.04
LINC00339-206ENST00000634451 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 NUDT15Q9NV35 164 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 RPH3ALQ9UNE2 315 aa8.53□□□□□ -1.04
LINC00339-206ENST00000634451 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.05
LINC00339-206ENST00000634451 SIX6O95475 246 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 TYMSP04818 313 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
LINC00339-206ENST00000634451 Q6ZSA8 131 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 STX12Q86Y82 276 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 OR5C1Q8NGR4 320 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 SPXQ9BT56 116 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 OR5AC2Q9NZP5 309 aa8.52□□□□□ -1.05
LINC00339-206ENST00000634451 TRGV11A0A075B6L2 103 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms