RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 CEND1Q8N111 149 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 TMEM256Q8N2U0 113 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 PRSS47A8MTI9 375 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 MORN5Q5VZ52 161 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 GAFA1Q96PS6 74 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 LYNX1G3V0Z9 82 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 LYNX1P0DP58 116 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 GGNQ86UU5 652 aa10.65□□□□□ -0.7
SYNGAP1-208ENST00000629380 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.71
SYNGAP1-208ENST00000629380 SEC61GP60059 68 aa10.65□□□□□ -0.71
SYNGAP1-208ENST00000629380 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.71
SYNGAP1-208ENST00000629380 PAX9P55771 341 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 MAJINQ3KP22 176 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 Q6ZS92 163 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 RPP25LQ8N5L8 163 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 SMIM20Q8N5G0 67 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 SDHAF1A6NFY7 115 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 C5orf47Q569G3 176 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 BRD3OSQ6XYD6 125 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 LINC00527Q9UJ94 153 aa10.64□□□□□ -0.71
SYNGAP1-208ENST00000629380 ADAMTS20P59510 1910 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 CD177Q8N6Q3 437 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 TMEM14CQ9P0S9 112 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 F6UB75 175 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 UBE2E1P51965 193 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 GAS1P54826 345 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 OVOL3O00110 214 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 POU2AF1Q16633 256 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 C10orf55Q5SWW7 151 aa10.63□□□□□ -0.71
SYNGAP1-208ENST00000629380 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 LHFPL1Q86WI0 220 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 H0YIZ8 118 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 TGFBR3LH3BV60 316 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 CLPSP04118 112 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 C8orf86Q6ZUL3 223 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 ARMS2P0C7Q2 107 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 FN1P02751 2386 aaKnown RBP10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 A0A0G2JNJ9 132 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 NDUFA4O00483 81 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 Q9UFV3 132 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 MSMBP08118 114 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 FOXF2Q12947 444 aa10.62□□□□□ -0.71
SYNGAP1-208ENST00000629380 MBD3L4A6NDZ8 208 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 MBD3L3A6NE82 208 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 MBD3L5A6NJ08 208 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 IGKV1-5P01602 117 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 MBD3L2Q8NHZ7 208 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 MRPL36Q9P0J6 103 aaKnown RBP10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 XCL2Q9UBD3 114 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 DEFB131AP59861 70 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 ZNF362Q5T0B9 420 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 LYL1P12980 280 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 TIRAPP58753 221 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 SPINK13Q1W4C9 94 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 F8VRH5 84 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 C8orf49Q96NF6 230 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 C15orf62A8K5M9 175 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 CFHR3Q02985 330 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 MST1LQ2TV78 715 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 SHISA3A0PJX4 238 aa10.61□□□□□ -0.71
SYNGAP1-208ENST00000629380 PIEZO1Q92508 2521 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 IGKV1-27A0A075B6S5 117 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 COX8AP10176 69 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 MDS2Q8NDY4 140 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 FLVCR1-AS1Q8TAF5 88 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 FGFBP3Q8TAT2 258 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 ETDCA0A1B0GVM5 59 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 LAIR2Q6ISS4 152 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 BAALCQ8WXS3 180 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 J3QQQ9 107 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 WFDC9Q8NEX5 89 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 SMIM27A0A1W2PRY6 76 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 SIVA1O15304 175 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 CSRP3P50461 194 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 SP5Q6BEB4 398 aaPredicted RBP10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 IGFL3Q6UXB1 125 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 PYGO2Q9BRQ0 406 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 HERV-K104P63124 156 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 NTF4P34130 210 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 KLK9Q9UKQ9 250 aa10.6□□□□□ -0.71
SYNGAP1-208ENST00000629380 TRAV3A0A0B4J244 114 aa10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 LINC00473A8K010 186 aa10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 PYY3Q5JQD4 70 aa10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 F8P00451 2351 aa10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 PAQR4Q8N4S7 273 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 TFF1P04155 84 aa10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 KLF2Q9Y5W3 355 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 C4orf48Q5BLP8 95 aa10.59□□□□□ -0.71
SYNGAP1-208ENST00000629380 Q6P435 159 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms