RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 CFAP126Q5VTH2 177 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 GPR107Q5VW38 600 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 TMEM182Q6ZP80 229 aaPredicted RBP3.38□□□□□ -1.87
LINC00649-220ENST00000628906 TBC1D26Q86UD7 250 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 CROCCP3Q8IVE0 287 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 ZFAND2AQ8N6M9 145 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 OR5AP2Q8NGF4 316 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 LHFPL5Q8TAF8 219 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 CCDC124Q96CT7 223 aaKnown RBP3.38□□□□□ -1.87
LINC00649-220ENST00000628906 V9GY05 133 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 SLC17A3O00476 420 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 ERCC8Q13216 396 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 TRIM16LQ309B1 348 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 PRR9Q5T870 116 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 PRR27Q6MZM9 219 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 ACOT7LQ6ZUV0 252 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 SPATA24Q86W54 205 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 APH1BQ8WW43 257 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 CCDC90BQ9GZT6 254 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 AGPAT4-IT1Q9H0P7 198 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 ATG5Q9H1Y0 275 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 SLC39A9Q9NUM3 307 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 U3KQ87 197 aa3.37□□□□□ -1.87
LINC00649-220ENST00000628906 A0A087X002 238 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 IRGMA1A4Y4 181 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 MEIS3P1A6NDR6 274 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 EFCAB10A6NFE3 127 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 TMEM262E9PQX1 116 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 TNFAIP8O95379 198 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 TSHBP01222 138 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 ANGP03950 147 aaKnown RBP3.36□□□□□ -1.87
LINC00649-220ENST00000628906 GZMBP10144 247 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 AKR1C2P52895 323 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 ZNF876PQ49A33 203 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 PHLDA2Q53GA4 152 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 TYMSOSQ8TAI1 123 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 SAT2Q96F10 170 aaPredicted RBP3.36□□□□□ -1.87
LINC00649-220ENST00000628906 TMEM80Q96HE8 168 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 MGLLQ99685 303 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 ZNF2Q9BSG1 426 aaPredicted RBP3.36□□□□□ -1.87
LINC00649-220ENST00000628906 SRRQ9GZT4 340 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 NAA50Q9GZZ1 169 aaKnown RBP3.36□□□□□ -1.87
LINC00649-220ENST00000628906 MIXL1Q9H2W2 232 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 AUNIPQ9H7T9 357 aa3.36□□□□□ -1.87
LINC00649-220ENST00000628906 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.36□□□□□ -1.87
LINC00649-220ENST00000628906 TRGV11A0A075B6L2 103 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 IGHV3-73A0A0B4J1V6 119 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 A0A0G2JRQ6 117 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 FAM24AA6NFZ4 105 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 CASQ2O14958 399 aaPredicted RBP3.35□□□□□ -1.87
LINC00649-220ENST00000628906 CTDSPLO15194 276 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 WBP4O75554 376 aaKnown RBP3.35□□□□□ -1.87
LINC00649-220ENST00000628906 S100GP29377 79 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 AMTP48728 403 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 FGF8P55075 233 aaPredicted RBP3.35□□□□□ -1.87
LINC00649-220ENST00000628906 ATP5IP56385 69 aaPredicted RBP3.35□□□□□ -1.87
LINC00649-220ENST00000628906 MPV17L2Q567V2 206 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 MUC21Q5SSG8 566 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 TMEM91Q6ZNR0 172 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 FP248Q71RG6 208 aaPredicted RBP3.35□□□□□ -1.87
LINC00649-220ENST00000628906 ZNF546Q86UE3 836 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 TSKUQ8WUA8 353 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 MRPL53Q96EL3 112 aaKnown RBP3.35□□□□□ -1.87
LINC00649-220ENST00000628906 HSPB7Q9UBY9 170 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 PXMP4Q9Y6I8 212 aa3.35□□□□□ -1.87
LINC00649-220ENST00000628906 C5orf51A6NDU8 294 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 IFITM5A6NNB3 132 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 CEBPZOSA8MTT3 80 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 EIF3GO75821 320 aaKnown RBP eCLIP3.34□□□□□ -1.87
LINC00649-220ENST00000628906 SNRPCP09234 159 aaKnown RBP3.34□□□□□ -1.87
LINC00649-220ENST00000628906 ANXA7P20073 488 aaKnown RBP3.34□□□□□ -1.87
LINC00649-220ENST00000628906 PLP1P60201 277 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 EIF5AP63241 154 aaKnown RBP3.34□□□□□ -1.87
LINC00649-220ENST00000628906 LPCAT3Q6P1A2 487 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 C15orf56Q8N910 161 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 OR1S1Q8NH92 325 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 FXYD6Q9H0Q3 95 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 WFDC1Q9HC57 220 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 HIGD1AQ9Y241 93 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 PKIGQ9Y2B9 76 aa3.34□□□□□ -1.87
LINC00649-220ENST00000628906 HYPMO75409 117 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 ARL6IP5O75915 188 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 TNFRSF6BO95407 300 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 FAM159AQ6UWV7 190 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 LINC00269Q8N2A0 174 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 OR10G7Q8NGN6 311 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 YIPF6Q96EC8 236 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 RNF24Q9Y225 148 aa3.33□□□□□ -1.88
LINC00649-220ENST00000628906 TRAV6A0A075B6T7 132 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 A0A087WWL8 130 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 TRAV8-4A0A0B4J246 113 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 TRBV7-9A0A0J9YWB2 115 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 A0A1B0GVG6 124 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 DIRC3C9JPN6 131 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 H3BTX0 84 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 GNRH2O43555 120 aa3.32□□□□□ -1.88
LINC00649-220ENST00000628906 SCGNO76038 276 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms