RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 PMCHP20382 165 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 FAM106AQ4KMX7 169 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 Q6AWC8 147 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 C9orf47Q6ZRZ4 202 aa14.91□□□□□ -0.02
CHRNA4-209ENST00000627000 FABP5P3A8MUU1 101 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 ORM1P02763 201 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 SRD5A1P18405 259 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 ZNF705AQ6ZN79 300 aaPredicted RBP14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 NRN1Q9NPD7 142 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 RNF114Q9Y508 228 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 PDZD2O15018 2839 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 HELZ2Q9BYK8 2649 aaKnown RBP14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 LOC102724200A0A096LPH7 203 aaPredicted RBP14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 FAM19A2Q8N3H0 131 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 MIEN1Q9BRT3 115 aa14.9□□□□□ -0.02
CHRNA4-209ENST00000627000 TMEM213A2RRL7 107 aa14.89□□□□□ -0.03
CHRNA4-209ENST00000627000 FAM181BA6NEQ2 426 aa14.89□□□□□ -0.03
CHRNA4-209ENST00000627000 AMTP48728 403 aa14.89□□□□□ -0.03
CHRNA4-209ENST00000627000 TEX43Q6ZNM6 134 aa14.89□□□□□ -0.03
CHRNA4-209ENST00000627000 K7EMT4 169 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 GAGE1Q13065 139 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 FOXE3Q13461 319 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 Q6ZQT7 251 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 CLEC5AQ9NY25 188 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 M0QZ24 198 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 ZNF324O75467 553 aaPredicted RBP14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 ZNF25P17030 456 aaPredicted RBP14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 G0S2P27469 103 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 MYOZ3Q8TDC0 251 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 URB1-AS1Q96HZ7 61 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 C11orf21Q9P2W6 132 aa14.88□□□□□ -0.03
CHRNA4-209ENST00000627000 ELANEP08246 267 aa14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 BTF3P20290 206 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 GATD1Q8NB37 220 aa14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 BORCS7Q96B45 105 aa14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 VAMP8Q9BV40 100 aa14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 FLNAP21333 2647 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 SONP18583 2426 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 IGLC6P0CF74 106 aa14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 RPS20P60866 119 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 FER1L6-AS1Q8NA97 138 aa14.87□□□□□ -0.03
CHRNA4-209ENST00000627000 IGHV4OR15-8A0A075B7B6 117 aa14.86□□□□□ -0.03
CHRNA4-209ENST00000627000 A0A087WW49 117 aa14.86□□□□□ -0.03
CHRNA4-209ENST00000627000 LGALS1P09382 135 aaKnown RBP14.86□□□□□ -0.03
CHRNA4-209ENST00000627000 IGKV3D-20A0A0C4DH25 116 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 F6UB75 175 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 NTF3P20783 257 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 SRSF2Q01130 221 aaKnown RBP14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 LINC01559Q495D7 138 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 PRR9Q5T870 116 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 RNASEKQ6P5S7 137 aaKnown RBP14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 UFC1Q9Y3C8 167 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 A0A1B0GW15 77 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 CTRLP40313 264 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 NIT1Q86X76 327 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 Q8N2B8 174 aa14.85□□□□□ -0.03
CHRNA4-209ENST00000627000 DLEU1O43261 78 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 C18orf65Q6ZTR6 163 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 J3KRW8 73 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 SYNJ2BPP57105 145 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 ZNF493Q6ZR52 646 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 WFDC3Q8IUB2 231 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 UBE2E2Q96LR5 201 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 GOLT1BQ9Y3E0 138 aa14.84□□□□□ -0.03
CHRNA4-209ENST00000627000 OVOL1O14753 267 aa14.83□□□□□ -0.04
CHRNA4-209ENST00000627000 HSBP1O75506 76 aa14.83□□□□□ -0.04
CHRNA4-209ENST00000627000 LINC00614P0C842 121 aa14.83□□□□□ -0.04
CHRNA4-209ENST00000627000 HIST1H1AQ02539 215 aaPredicted RBP14.83□□□□□ -0.04
CHRNA4-209ENST00000627000 KRTAP1-1Q07627 177 aa14.83□□□□□ -0.04
CHRNA4-209ENST00000627000 RNF152Q8N8N0 203 aa14.83□□□□□ -0.04
CHRNA4-209ENST00000627000 OR10J6PQ8NGY7 276 aa14.83□□□□□ -0.04
CHRNA4-209ENST00000627000 KRTDAPP60985 99 aa14.82□□□□□ -0.04
CHRNA4-209ENST00000627000 TWIST1Q15672 202 aa14.82□□□□□ -0.04
CHRNA4-209ENST00000627000 AMN1Q8IY45 258 aa14.82□□□□□ -0.04
CHRNA4-209ENST00000627000 LINC00477Q96M19 166 aa14.82□□□□□ -0.04
CHRNA4-209ENST00000627000 MSRB1Q9NZV6 116 aa14.82□□□□□ -0.04
CHRNA4-209ENST00000627000 ITPR2Q14571 2701 aa14.82□□□□□ -0.04
CHRNA4-209ENST00000627000 HOXD3P31249 432 aaPredicted RBP14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 KLHDC1Q8N7A1 406 aa14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 DCANP1Q8TF63 244 aa14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 DEFB136Q30KP8 78 aa14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 HIST2H2BDQ6DRA6 164 aa14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 ZFAND2AQ8N6M9 145 aa14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 OR8A1Q8NGG7 326 aa14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 TMEM208Q9BTX3 173 aa14.81□□□□□ -0.04
CHRNA4-209ENST00000627000 PMCHL1Q16048 86 aa14.8□□□□□ -0.04
CHRNA4-209ENST00000627000 TFPI2P48307 235 aa14.8□□□□□ -0.04
CHRNA4-209ENST00000627000 FAM104BQ5XKR9 115 aa14.8□□□□□ -0.04
CHRNA4-209ENST00000627000 CBY1Q9Y3M2 126 aa14.8□□□□□ -0.04
CHRNA4-209ENST00000627000 LENEPQ9Y5L5 61 aa14.8□□□□□ -0.04
CHRNA4-209ENST00000627000 DNAJC9-AS1A6NH13 148 aa14.79□□□□□ -0.04
CHRNA4-209ENST00000627000 M0R2Z0 102 aa14.79□□□□□ -0.04
CHRNA4-209ENST00000627000 CSN3P07498 182 aa14.79□□□□□ -0.04
CHRNA4-209ENST00000627000 COL5A1-AS1Q5SY13 56 aa14.79□□□□□ -0.04
CHRNA4-209ENST00000627000 KIR3DS1Q14943 382 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 FOXC2Q99958 501 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 MS4A6AQ9H2W1 248 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 PAM16Q9Y3D7 125 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 D6R8Y8 96 aa14.78□□□□□ -0.04
CHRNA4-209ENST00000627000 TCTEX1D4Q5JR98 221 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms