RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 KRTAP1-5Q9BYS1 174 aa13.25□□□□□ -0.29
ATG4B-226ENST00000625810 MRPL16Q9NX20 251 aaKnown RBP13.25□□□□□ -0.29
ATG4B-226ENST00000625810 TRBV7-9A0A0J9YWB2 115 aa13.24□□□□□ -0.29
ATG4B-226ENST00000625810 PAX4O43316 350 aa13.24□□□□□ -0.29
ATG4B-226ENST00000625810 PET100P0DJ07 73 aa13.24□□□□□ -0.29
ATG4B-226ENST00000625810 UBE2L3P68036 154 aaKnown RBP13.24□□□□□ -0.29
ATG4B-226ENST00000625810 LYPD1Q8N2G4 141 aa13.24□□□□□ -0.29
ATG4B-226ENST00000625810 ST6GAL2Q96JF0 529 aa13.24□□□□□ -0.29
ATG4B-226ENST00000625810 MARVELD1Q9BSK0 173 aa13.24□□□□□ -0.29
ATG4B-226ENST00000625810 HSPB11Q9Y547 144 aa13.24□□□□□ -0.29
ATG4B-226ENST00000625810 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
ATG4B-226ENST00000625810 CDK2AP2O75956 126 aa13.23□□□□□ -0.29
ATG4B-226ENST00000625810 MPC2O95563 127 aa13.23□□□□□ -0.29
ATG4B-226ENST00000625810 TAS2R45P59539 299 aa13.23□□□□□ -0.29
ATG4B-226ENST00000625810 ZNF415Q09FC8 603 aa13.23□□□□□ -0.29
ATG4B-226ENST00000625810 SMIM3Q9BZL3 60 aa13.23□□□□□ -0.29
ATG4B-226ENST00000625810 ICOSQ9Y6W8 199 aa13.23□□□□□ -0.29
ATG4B-226ENST00000625810 RPL12P30050 165 aaKnown RBP13.22□□□□□ -0.29
ATG4B-226ENST00000625810 DEFA1P59665 94 aa13.22□□□□□ -0.29
ATG4B-226ENST00000625810 DEFA3P59666 94 aa13.22□□□□□ -0.29
ATG4B-226ENST00000625810 KHDC3LQ587J8 217 aa13.22□□□□□ -0.29
ATG4B-226ENST00000625810 MUC21Q5SSG8 566 aa13.22□□□□□ -0.29
ATG4B-226ENST00000625810 SPATA12Q7Z6I5 190 aa13.22□□□□□ -0.29
ATG4B-226ENST00000625810 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
ATG4B-226ENST00000625810 SLAQ13239 276 aa13.21□□□□□ -0.29
ATG4B-226ENST00000625810 ZNF266Q14584 549 aa13.21□□□□□ -0.29
ATG4B-226ENST00000625810 PRO0255Q9UI72 69 aa13.21□□□□□ -0.29
ATG4B-226ENST00000625810 A6NHS1 94 aa13.2□□□□□ -0.3
ATG4B-226ENST00000625810 BTF3P20290 206 aaKnown RBP13.2□□□□□ -0.3
ATG4B-226ENST00000625810 HYLS1Q96M11 299 aa13.2□□□□□ -0.3
ATG4B-226ENST00000625810 HHLA3Q9XRX5 114 aa13.2□□□□□ -0.3
ATG4B-226ENST00000625810 APOBP04114 4563 aaKnown RBP13.2□□□□□ -0.3
ATG4B-226ENST00000625810 DIRC3C9JPN6 131 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 SIVA1O15304 175 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 FAM159AQ6UWV7 190 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 CMTM2Q8TAZ6 248 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 C8orf49Q96NF6 230 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 MBD2Q9UBB5 411 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 RPH3ALQ9UNE2 315 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 LENEPQ9Y5L5 61 aa13.19□□□□□ -0.3
ATG4B-226ENST00000625810 DNAH5Q8TE73 4624 aa13.18□□□□□ -0.3
ATG4B-226ENST00000625810 TRGV4A0A0C4DH28 118 aa13.18□□□□□ -0.3
ATG4B-226ENST00000625810 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
ATG4B-226ENST00000625810 CRYBA4P53673 196 aa13.18□□□□□ -0.3
ATG4B-226ENST00000625810 FHL2Q14192 279 aa13.18□□□□□ -0.3
ATG4B-226ENST00000625810 MRPL23Q16540 153 aaKnown RBP13.18□□□□□ -0.3
ATG4B-226ENST00000625810 FAM74A1Q5RGS3 127 aa13.18□□□□□ -0.3
ATG4B-226ENST00000625810 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
ATG4B-226ENST00000625810 TRGV11A0A075B6L2 103 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 A0A1W2PPV4 95 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 PGPA6NDG6 321 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 NXPH4O95158 308 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 LINC00315P59091 139 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 TMEM183BQ1AE95 376 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-226ENST00000625810 Q6AWC8 147 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 TMEM183AQ8IXX5 376 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 MAPKAPK5-AS1Q8N8E1 139 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 OTORQ9NRC9 128 aa13.17□□□□□ -0.3
ATG4B-226ENST00000625810 SPXQ9BT56 116 aa13.16□□□□□ -0.3
ATG4B-226ENST00000625810 NAGKQ9UJ70 344 aa13.16□□□□□ -0.3
ATG4B-226ENST00000625810 LYPD5Q6UWN5 251 aa13.15□□□□□ -0.3
ATG4B-226ENST00000625810 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
ATG4B-226ENST00000625810 TMED6Q8WW62 240 aa13.15□□□□□ -0.3
ATG4B-226ENST00000625810 WFDC1Q9HC57 220 aa13.15□□□□□ -0.3
ATG4B-226ENST00000625810 SFTA3P0C7M3 94 aa13.14□□□□□ -0.31
ATG4B-226ENST00000625810 GOLT1AQ6ZVE7 132 aa13.14□□□□□ -0.31
ATG4B-226ENST00000625810 NEGR1Q7Z3B1 354 aa13.14□□□□□ -0.31
ATG4B-226ENST00000625810 PCNPQ8WW12 178 aaKnown RBP13.14□□□□□ -0.31
ATG4B-226ENST00000625810 SRIP30626 198 aa13.13□□□□□ -0.31
ATG4B-226ENST00000625810 KRTAP10-2P60368 255 aa13.13□□□□□ -0.31
ATG4B-226ENST00000625810 OR10G4Q8NGN3 311 aa13.13□□□□□ -0.31
ATG4B-226ENST00000625810 RASL10AQ92737 203 aa13.13□□□□□ -0.31
ATG4B-226ENST00000625810 ZNF479Q96JC4 524 aa13.13□□□□□ -0.31
ATG4B-226ENST00000625810 RAB2AP61019 212 aa13.12□□□□□ -0.31
ATG4B-226ENST00000625810 IQCF2Q8IXL9 164 aa13.12□□□□□ -0.31
ATG4B-226ENST00000625810 OR10G9Q8NGN4 311 aa13.12□□□□□ -0.31
ATG4B-226ENST00000625810 OR10G7Q8NGN6 311 aa13.12□□□□□ -0.31
ATG4B-226ENST00000625810 TRAV9-2A0A087WT02 112 aa13.11□□□□□ -0.31
ATG4B-226ENST00000625810 TRAV21A0A0B4J279 112 aa13.11□□□□□ -0.31
ATG4B-226ENST00000625810 HMGB3O15347 200 aaKnown RBP13.11□□□□□ -0.31
ATG4B-226ENST00000625810 GNRH2O43555 120 aa13.11□□□□□ -0.31
ATG4B-226ENST00000625810 GYPEP15421 78 aa13.11□□□□□ -0.31
ATG4B-226ENST00000625810 ARL6IP6Q8N6S5 226 aa13.11□□□□□ -0.31
ATG4B-226ENST00000625810 TREM1Q9NP99 234 aa13.11□□□□□ -0.31
ATG4B-226ENST00000625810 F6UZH7 168 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 K7EQD1 137 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 EREGO14944 169 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 ORM1P02763 201 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 TDRG1Q3Y452 100 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 Q8N1X5 172 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 OR4C5Q8NGB2 326 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 LY96Q9Y6Y9 160 aa13.1□□□□□ -0.31
ATG4B-226ENST00000625810 TRAV8-1A0A0A6YYK1 113 aa13.09□□□□□ -0.31
ATG4B-226ENST00000625810 TRAV4A0A0B4J268 109 aa13.09□□□□□ -0.31
ATG4B-226ENST00000625810 M0R2P5 195 aa13.09□□□□□ -0.31
ATG4B-226ENST00000625810 GNG5P63218 68 aa13.09□□□□□ -0.31
ATG4B-226ENST00000625810 Q6ZRN7 208 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-226ENST00000625810 NFE4Q86UQ8 179 aa13.09□□□□□ -0.31
ATG4B-226ENST00000625810 TNFRSF18Q9Y5U5 241 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms