RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 SLC25A20O43772 301 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 KISS1Q15726 138 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 MDP1Q86V88 176 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 C16orf95Q9H693 158 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 MAP1AP78559 2803 aaPredicted RBP7.22□□□□□ -1.25
USB1-216ENST00000624720 TCRAP04437 139 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 HILS1P60008 231 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 FAM201AQ5SY85 155 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 GDF5OSQ5U4N7 250 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 C1orf158Q8N1D5 194 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 UBALD1Q8TB05 177 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 C17orf77Q96MU5 243 aa7.22□□□□□ -1.25
USB1-216ENST00000624720 PLCE1Q9P212 2302 aa7.21□□□□□ -1.25
USB1-216ENST00000624720 SPRY3O43610 288 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 FCER1GP30273 86 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 LOXL3P58215 753 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 LYPD6Q86Y78 171 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 MYOZ3Q8TDC0 251 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 NTN5Q8WTR8 489 aaPredicted RBP7.21□□□□□ -1.26
USB1-216ENST00000624720 ARHGAP5-AS1Q96IT6 56 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 UBE2L5PA0A1B0GUS4 154 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 TMEM14DPA8MWL7 114 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 NPYP01303 97 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 TFF1P04155 84 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 UBE2D3P61077 147 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 UBE2D2P62837 147 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 SFTA2Q6UW10 78 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 DRAM1Q8N682 238 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 HIST1H4GQ99525 98 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 ZNF442Q9H7R0 627 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 LRBAP50851 2863 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 PTPRBP23467 1997 aa7.21□□□□□ -1.26
USB1-216ENST00000624720 SVEP1Q4LDE5 3571 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 IGKV1-27A0A075B6S5 117 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 A0A0A6YYD4 124 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 IGHV1-2P23083 117 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 LOXP28300 417 aaPredicted RBP7.2□□□□□ -1.26
USB1-216ENST00000624720 NPC2P61916 151 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 PIGYQ3MUY2 71 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 HS3ST6Q96QI5 342 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 PGPA6NDG6 321 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 MGST3O14880 152 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 CA6P23280 308 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 OR8A1Q8NGG7 326 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 PKD1L2Q7Z442 2459 aa7.2□□□□□ -1.26
USB1-216ENST00000624720 HEATR1Q9H583 2144 aaKnown RBP7.19□□□□□ -1.26
USB1-216ENST00000624720 ATOX1O00244 68 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 SPRY2O43597 315 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 CRYGSP22914 178 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 FXYD4P59646 89 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 Q71RC1 249 aaPredicted RBP7.19□□□□□ -1.26
USB1-216ENST00000624720 PIFOQ8TCI5 191 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 TRGV9Q99603 122 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 MED13LQ71F56 2210 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 IGHV3OR15-7A0A075B7D8 119 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 H3BT86 120 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 LGALS9O00182 355 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 CCL21O00585 134 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 DUTP33316 252 aaKnown RBP7.19□□□□□ -1.26
USB1-216ENST00000624720 CACNG7P62955 275 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 SLC25A48Q6ZT89 311 aaKnown RBP7.19□□□□□ -1.26
USB1-216ENST00000624720 LINC00596Q86U02 117 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 RNF182Q8N6D2 247 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 LIME1Q9H400 295 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 U3KQE9 123 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 CACNA1DQ01668 2161 aa7.19□□□□□ -1.26
USB1-216ENST00000624720 ASH1LQ9NR48 2969 aaKnown RBP7.19□□□□□ -1.26
USB1-216ENST00000624720 TRAV41A0A0B4J266 112 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 FAM240AA0A1B0GVK7 77 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 SLC25A16P16260 332 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 PDPNQ86YL7 162 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 FOXC2Q99958 501 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 TTTY13Q9BZ97 58 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 EPG5Q9HCE0 2579 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 IGF1P05019 195 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 GRPP07492 148 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 RTL8AQ9BWD3 113 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 LINC01549A6NIU2 74 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 SYNGR2O43760 224 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 ZNF138P52744 262 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 PCBD1P61457 104 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 UBE2L3P68036 154 aaKnown RBP7.18□□□□□ -1.26
USB1-216ENST00000624720 RNF7Q9UBF6 113 aa7.18□□□□□ -1.26
USB1-216ENST00000624720 IGKV3D-15A0A087WSY6 115 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 IGKV1D-8A0A087WSZ0 117 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 IGKV1-12A0A0C4DH73 117 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 C19orf71A6NCJ1 209 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 EPM2AB3EWF7 344 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 IGKV1D-12P01611 117 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 UBE2E1P51965 193 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 Q6ZR03 302 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 C22orf34Q6ZV56 151 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 SEM1Q6ZVN7 128 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 ZNF414Q96IQ9 312 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 UBE2E2Q96LR5 201 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 MGST2Q99735 147 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 AAMDCQ9H7C9 122 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 CALYQ9NYX4 217 aa7.17□□□□□ -1.26
USB1-216ENST00000624720 NCBP2LA6PVI3 153 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms