RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 C16orf95Q9H693 158 aa12.38□□□□□ -0.43
LDB3-208ENST00000623007 PMCHP20382 165 aa12.37□□□□□ -0.43
LDB3-208ENST00000623007 SYNJ2BPP57105 145 aa12.37□□□□□ -0.43
LDB3-208ENST00000623007 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
LDB3-208ENST00000623007 TP53TG3Q9ULZ0 132 aa12.37□□□□□ -0.43
LDB3-208ENST00000623007 C2orf70A6NJV1 201 aa12.36□□□□□ -0.43
LDB3-208ENST00000623007 CACNG7P62955 275 aa12.36□□□□□ -0.43
LDB3-208ENST00000623007 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
LDB3-208ENST00000623007 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
LDB3-208ENST00000623007 ZNF324O75467 553 aaPredicted RBP12.35□□□□□ -0.43
LDB3-208ENST00000623007 PPBPP02775 128 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 SSBP4Q9BWG4 385 aaPredicted RBP12.35□□□□□ -0.43
LDB3-208ENST00000623007 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 HSBP1O75506 76 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 DUSP14O95147 198 aaKnown RBP12.35□□□□□ -0.43
LDB3-208ENST00000623007 OR5AL1P0C617 328 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 MED14OSP0DP75 135 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 SRD5A1P18405 259 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 OR1N2Q8NGR9 330 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 TMEM191AQ9H0A3 160 aa12.35□□□□□ -0.43
LDB3-208ENST00000623007 POLQO75417 2590 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 K7EQG2 157 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 LEPP41159 167 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 AMTP48728 403 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 EBLN2Q6P2I7 272 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 DUX5Q96PT3 197 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 LAMTOR2Q9Y2Q5 125 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 APCP25054 2843 aa12.34□□□□□ -0.43
LDB3-208ENST00000623007 TMSB15BA0A087X1C1 80 aa12.33□□□□□ -0.44
LDB3-208ENST00000623007 TSPOP30536 169 aa12.33□□□□□ -0.44
LDB3-208ENST00000623007 TWIST1Q15672 202 aa12.33□□□□□ -0.44
LDB3-208ENST00000623007 FAM104BQ5XKR9 115 aa12.33□□□□□ -0.44
LDB3-208ENST00000623007 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.44
LDB3-208ENST00000623007 OR11H1Q8NG94 326 aa12.33□□□□□ -0.44
LDB3-208ENST00000623007 CENPEQ02224 2701 aa12.33□□□□□ -0.44
LDB3-208ENST00000623007 ABCA12Q86UK0 2595 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 IGHV4-4A0A075B6R2 117 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 LINC00310P59036 64 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 HILS1P60008 231 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 ZFAND2AQ8N6M9 145 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 OR9G4Q8NGQ1 327 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 CELSR2Q9HCU4 2923 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 IGKV3D-20A0A0C4DH25 116 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 SNAI2O43623 268 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 TCTEX1D4Q5JR98 221 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 ORMDL3Q8N138 153 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 KLHL30-AS1Q8NEE0 82 aa12.32□□□□□ -0.44
LDB3-208ENST00000623007 NUPR1O60356 82 aa12.31□□□□□ -0.44
LDB3-208ENST00000623007 NDUFA7O95182 113 aa12.31□□□□□ -0.44
LDB3-208ENST00000623007 NTF3P20783 257 aa12.31□□□□□ -0.44
LDB3-208ENST00000623007 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
LDB3-208ENST00000623007 U3KQK5 164 aa12.31□□□□□ -0.44
LDB3-208ENST00000623007 KLLNB2CW77 178 aa12.3□□□□□ -0.44
LDB3-208ENST00000623007 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
LDB3-208ENST00000623007 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
LDB3-208ENST00000623007 NBPF19A0A087WUL8 3843 aa12.3□□□□□ -0.44
LDB3-208ENST00000623007 IGKV3-7A0A075B6H7 116 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 TRAV25A0A0B4J276 109 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 A0A1B0GUS0 222 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 TSTD3H0UI37 97 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 LINC00614P0C842 121 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 RCHY1Q96PM5 261 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 ESM1Q9NQ30 184 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 A0A0J9YX75 114 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 ASIPP42127 132 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
LDB3-208ENST00000623007 NIT1Q86X76 327 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 SIGLEC8Q9NYZ4 499 aa12.29□□□□□ -0.44
LDB3-208ENST00000623007 SCGB1D1O95968 90 aa12.28□□□□□ -0.44
LDB3-208ENST00000623007 FOSL1P15407 271 aa12.28□□□□□ -0.44
LDB3-208ENST00000623007 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
LDB3-208ENST00000623007 WFDC3Q8IUB2 231 aa12.28□□□□□ -0.44
LDB3-208ENST00000623007 DYNLRB2Q8TF09 96 aa12.28□□□□□ -0.44
LDB3-208ENST00000623007 GSN-AS1Q9NRJ2 163 aa12.28□□□□□ -0.44
LDB3-208ENST00000623007 NAGKQ9UJ70 344 aa12.28□□□□□ -0.44
LDB3-208ENST00000623007 VPS13CQ709C8 3753 aa12.27□□□□□ -0.45
LDB3-208ENST00000623007 PCP4L1A6NKN8 68 aa12.27□□□□□ -0.45
LDB3-208ENST00000623007 M0R2Z0 102 aa12.27□□□□□ -0.45
LDB3-208ENST00000623007 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
LDB3-208ENST00000623007 S100A4P26447 101 aaKnown RBP12.27□□□□□ -0.45
LDB3-208ENST00000623007 SLURP1P55000 103 aa12.27□□□□□ -0.45
LDB3-208ENST00000623007 PKIAP61925 76 aa12.27□□□□□ -0.45
LDB3-208ENST00000623007 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 FHL3Q13643 280 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 ZNF575Q86XF7 245 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 PRELID3AQ96N28 172 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 AP5S1Q9NUS5 200 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 OR4C46A6NHA9 309 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 ZNF705DP0CH99 300 aaPredicted RBP12.26□□□□□ -0.45
LDB3-208ENST00000623007 ZNF705BP0CI00 300 aaPredicted RBP12.26□□□□□ -0.45
LDB3-208ENST00000623007 CKS2P33552 79 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 RNASE4P34096 147 aaKnown RBP12.26□□□□□ -0.45
LDB3-208ENST00000623007 CMC4P56277 68 aaPredicted RBP12.26□□□□□ -0.45
LDB3-208ENST00000623007 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 Q6ZWC4 215 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 PRSS3P2Q8NHM4 247 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 LINC01006Q8NI28 216 aa12.26□□□□□ -0.45
LDB3-208ENST00000623007 SPAG8Q99932 426 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms