RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 TMEM200BQ69YZ2 307 aa4.53□□□□□ -1.68
EBF1-211ENST00000622875 TAF15Q92804 592 aaKnown RBP eCLIP4.53□□□□□ -1.68
EBF1-211ENST00000622875 TRGV9Q99603 122 aa4.53□□□□□ -1.68
EBF1-211ENST00000622875 HLA-DRB4X5D2U9 266 aa4.53□□□□□ -1.68
EBF1-211ENST00000622875 TRBV20OR9-2A0A075B6H5 130 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 A0A0B4J2C4 111 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 H3BT86 120 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 FAM53BQ14153 422 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 C10orf105Q8TEF2 133 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 C16orf92Q96LL3 132 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 PRSS27Q9BQR3 290 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 NCKAP5O14513 1909 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 IGHV1-45A0A0A0MS14 117 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 GHRHP01286 108 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 CRYGAP11844 174 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 NPWQ8N729 165 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 TMEM133Q9H2Q1 129 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 hADV29S1A0JD25 119 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 F2Z2F3 143 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 TCRAP04437 139 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 CCL20P78556 96 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 CNRIP1Q96F85 164 aaPredicted RBP4.52□□□□□ -1.69
EBF1-211ENST00000622875 TMEM222Q9H0R3 208 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 RNF114Q9Y508 228 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 CENPWQ5EE01 88 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 LINC00527Q9UJ94 153 aa4.52□□□□□ -1.69
EBF1-211ENST00000622875 TRBV5-5A0A0J9YX44 114 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 IGHV4-39P01824 125 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 IGFBP3P17936 291 aaPredicted RBP4.51□□□□□ -1.69
EBF1-211ENST00000622875 PI3P19957 117 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 UBE2BP63146 152 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 KIAA0040Q15053 153 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 SLC25A47Q6Q0C1 308 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 SEM1Q6ZVN7 128 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 FAM90A20PA6NIJ5 464 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 F6UB75 175 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 UPK2O00526 184 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 GATA3P23771 443 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 LINC00336Q6ZUF6 198 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 LY6G5BQ8NDX9 201 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 IL1F10Q8WWZ1 152 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 MRPL53Q96EL3 112 aaKnown RBP4.51□□□□□ -1.69
EBF1-211ENST00000622875 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
EBF1-211ENST00000622875 NXPH3O95157 252 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 FGF6P10767 208 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 PLNP26678 52 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 FOXA3P55318 350 aaPredicted RBP4.51□□□□□ -1.69
EBF1-211ENST00000622875 INSL4Q14641 139 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 C1QTNF5Q9BXJ0 243 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 LSM4Q9Y4Z0 139 aaKnown RBP4.51□□□□□ -1.69
EBF1-211ENST00000622875 MPDZO75970 2070 aa4.51□□□□□ -1.69
EBF1-211ENST00000622875 NOTCH3Q9UM47 2321 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 IGHV4-30-2A0A087WSY4 118 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 H3BP45 60 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 RPL18AQ02543 176 aaKnown RBP4.5□□□□□ -1.69
EBF1-211ENST00000622875 CIRBPQ14011 172 aaKnown RBP4.5□□□□□ -1.69
EBF1-211ENST00000622875 C1orf140Q5VVS0 124 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 SPATA12Q7Z6I5 190 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 TMEM86BQ8N661 226 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 PLPPR2Q96GM1 343 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 IMMP1LQ96LU5 166 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 APOHP02749 345 aaPredicted RBP4.5□□□□□ -1.69
EBF1-211ENST00000622875 CD55P08174 381 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 CTXN1P60606 82 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 ZNF718Q3SXZ3 478 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 PAQR4Q8N4S7 273 aaPredicted RBP4.5□□□□□ -1.69
EBF1-211ENST00000622875 C4orf45Q96LM5 186 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 CHCHD5Q9BSY4 110 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 C5orf66Q9H5L9 145 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 ALPK2Q86TB3 2170 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 IGLV3-12A0A075B6K2 115 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 PSMB8P28062 276 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 CR1LQ2VPA4 569 aa4.5□□□□□ -1.69
EBF1-211ENST00000622875 MRPL2Q5T653 305 aaKnown RBP4.5□□□□□ -1.69
EBF1-211ENST00000622875 RPS19BP1Q86WX3 136 aaKnown RBP4.5□□□□□ -1.69
EBF1-211ENST00000622875 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 GATA2P23769 480 aaPredicted RBP4.49□□□□□ -1.69
EBF1-211ENST00000622875 C1orf100Q5SVJ3 147 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 OR52N5Q8NH56 324 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 NTN5Q8WTR8 489 aaPredicted RBP4.49□□□□□ -1.69
EBF1-211ENST00000622875 TRBV5-7A0A0A0MS05 114 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 TCRBV5S1A1TA0A578 114 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 E9PQ18 207 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 TNFRSF13BO14836 293 aaPredicted RBP4.49□□□□□ -1.69
EBF1-211ENST00000622875 ZFP36P26651 326 aaKnown RBP4.49□□□□□ -1.69
EBF1-211ENST00000622875 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 WFDC3Q8IUB2 231 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 NEU4Q8WWR8 484 aaPredicted RBP4.49□□□□□ -1.69
EBF1-211ENST00000622875 NABP2Q9BQ15 211 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 IGHMP01871 453 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 ELANEP08246 267 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 IFI27P40305 119 aaPredicted RBP4.49□□□□□ -1.69
EBF1-211ENST00000622875 ZNF493Q6ZR52 646 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 SLC25A48Q6ZT89 311 aaKnown RBP4.49□□□□□ -1.69
EBF1-211ENST00000622875 FMC1Q96HJ9 113 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 PYGO1Q9Y3Y4 419 aa4.49□□□□□ -1.69
EBF1-211ENST00000622875 R4GMQ9 66 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms