RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 NPCDR1Q9BY65 106 aa16.16■□□□□ 0.18
CPSF1-214ENST00000622776 NUDT15Q9NV35 164 aa16.16■□□□□ 0.18
CPSF1-214ENST00000622776 ZNF138P52744 262 aa16.15■□□□□ 0.18
CPSF1-214ENST00000622776 ZNF415Q09FC8 603 aa16.15■□□□□ 0.18
CPSF1-214ENST00000622776 MIR17HGQ75NE6 70 aa16.15■□□□□ 0.18
CPSF1-214ENST00000622776 MRPL32Q9BYC8 188 aaKnown RBP16.15■□□□□ 0.18
CPSF1-214ENST00000622776 LY96Q9Y6Y9 160 aa16.15■□□□□ 0.18
CPSF1-214ENST00000622776 KRTAP10-1P60331 282 aa16.14■□□□□ 0.17
CPSF1-214ENST00000622776 OR51M1Q9H341 326 aa16.14■□□□□ 0.17
CPSF1-214ENST00000622776 TRGV4A0A0C4DH28 118 aa16.13■□□□□ 0.17
CPSF1-214ENST00000622776 TRBV7-9A0A0J9YWB2 115 aa16.13■□□□□ 0.17
CPSF1-214ENST00000622776 E5RGE8 158 aa16.13■□□□□ 0.17
CPSF1-214ENST00000622776 IFNA5P01569 189 aa16.13■□□□□ 0.17
CPSF1-214ENST00000622776 Q8TAT8 98 aa16.13■□□□□ 0.17
CPSF1-214ENST00000622776 THAP6Q8TBB0 222 aa16.12■□□□□ 0.17
CPSF1-214ENST00000622776 MSRB1Q9NZV6 116 aa16.12■□□□□ 0.17
CPSF1-214ENST00000622776 VPS13BQ7Z7G8 4022 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 K7EQD1 137 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 H2AFB2P0C5Z0 115 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 OR10J4P0C629 311 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 SFTA3P0C7M3 94 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 SRIP30626 198 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 NHLH2Q02577 135 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 MUC21Q5SSG8 566 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 Q5VSD8 79 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 WFDC10BQ8IUB3 73 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 IQCF2Q8IXL9 164 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 FRZBQ92765 325 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 FXYD5Q96DB9 178 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 ZNF479Q96JC4 524 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 PAXXQ9BUH6 204 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 MDFICQ9P1T7 246 aa16.11■□□□□ 0.17
CPSF1-214ENST00000622776 K7EP13 123 aa16.1■□□□□ 0.17
CPSF1-214ENST00000622776 ZNF266Q14584 549 aa16.1■□□□□ 0.17
CPSF1-214ENST00000622776 PHYHIPLQ96FC7 376 aa16.1■□□□□ 0.17
CPSF1-214ENST00000622776 GYPEP15421 78 aa16.09■□□□□ 0.17
CPSF1-214ENST00000622776 EVI2AP22794 236 aa16.09■□□□□ 0.17
CPSF1-214ENST00000622776 OR10G4Q8NGN3 311 aa16.09■□□□□ 0.17
CPSF1-214ENST00000622776 OR5C1Q8NGR4 320 aa16.09■□□□□ 0.17
CPSF1-214ENST00000622776 PCNPQ8WW12 178 aaKnown RBP16.09■□□□□ 0.17
CPSF1-214ENST00000622776 RASL10AQ92737 203 aa16.08■□□□□ 0.16
CPSF1-214ENST00000622776 RBAKDNA6NC62 111 aa16.07■□□□□ 0.16
CPSF1-214ENST00000622776 ORM1P02763 201 aa16.07■□□□□ 0.16
CPSF1-214ENST00000622776 CSN1S1P47710 185 aa16.07■□□□□ 0.16
CPSF1-214ENST00000622776 SPXQ9BT56 116 aa16.07■□□□□ 0.16
CPSF1-214ENST00000622776 SRRM2Q9UQ35 2752 aaKnown RBP16.07■□□□□ 0.16
CPSF1-214ENST00000622776 MYCBP2O75592 4640 aa16.06■□□□□ 0.16
CPSF1-214ENST00000622776 RANP62826 216 aaKnown RBP16.06■□□□□ 0.16
CPSF1-214ENST00000622776 TMEM183BQ1AE95 376 aa16.06■□□□□ 0.16
CPSF1-214ENST00000622776 TMEM183AQ8IXX5 376 aa16.06■□□□□ 0.16
CPSF1-214ENST00000622776 SLC25A31Q9H0C2 315 aa16.06■□□□□ 0.16
CPSF1-214ENST00000622776 OR7C2O60412 319 aa16.05■□□□□ 0.16
CPSF1-214ENST00000622776 GCSHP23434 173 aa16.05■□□□□ 0.16
CPSF1-214ENST00000622776 Q6AWC8 147 aa16.05■□□□□ 0.16
CPSF1-214ENST00000622776 TXNDC17Q9BRA2 123 aa16.05■□□□□ 0.16
CPSF1-214ENST00000622776 KCNIP2Q9NS61 270 aa16.05■□□□□ 0.16
CPSF1-214ENST00000622776 TRGV11A0A075B6L2 103 aa16.04■□□□□ 0.16
CPSF1-214ENST00000622776 FAM240BA0A1B0GVZ2 78 aa16.04■□□□□ 0.16
CPSF1-214ENST00000622776 CRYGDP07320 174 aa16.04■□□□□ 0.16
CPSF1-214ENST00000622776 FAM159AQ6UWV7 190 aa16.04■□□□□ 0.16
CPSF1-214ENST00000622776 WDR61Q9GZS3 305 aaKnown RBP16.04■□□□□ 0.16
CPSF1-214ENST00000622776 SMR3BP02814 79 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-214ENST00000622776 C10orf126Q8N4M7 172 aa16.03■□□□□ 0.16
CPSF1-214ENST00000622776 LENEPQ9Y5L5 61 aa16.03■□□□□ 0.16
CPSF1-214ENST00000622776 TRAV4A0A0B4J268 109 aa16.02■□□□□ 0.16
CPSF1-214ENST00000622776 C9JCJ5 164 aa16.02■□□□□ 0.16
CPSF1-214ENST00000622776 CCDC32Q9BV29 185 aa16.02■□□□□ 0.16
CPSF1-214ENST00000622776 DIRC3C9JPN6 131 aa16.01■□□□□ 0.15
CPSF1-214ENST00000622776 SIX6O95475 246 aa16.01■□□□□ 0.15
CPSF1-214ENST00000622776 UBE2L3P68036 154 aaKnown RBP16.01■□□□□ 0.15
CPSF1-214ENST00000622776 OR5AC2Q9NZP5 309 aa16.01■□□□□ 0.15
CPSF1-214ENST00000622776 C17orf112F2Z3M2 114 aa16■□□□□ 0.15
CPSF1-214ENST00000622776 TDRG1Q3Y452 100 aa16■□□□□ 0.15
CPSF1-214ENST00000622776 OR4C5Q8NGB2 326 aa16■□□□□ 0.15
CPSF1-214ENST00000622776 NAGKQ9UJ70 344 aa16■□□□□ 0.15
CPSF1-214ENST00000622776 LOC100131303A0A0U1RQF7 123 aa15.99■□□□□ 0.15
CPSF1-214ENST00000622776 H0YIZ8 118 aa15.99■□□□□ 0.15
CPSF1-214ENST00000622776 LRRC37A5PQ49AS3 106 aa15.99■□□□□ 0.15
CPSF1-214ENST00000622776 M0R2P5 195 aa15.98■□□□□ 0.15
CPSF1-214ENST00000622776 MZT2BQ6NZ67 158 aa15.98■□□□□ 0.15
CPSF1-214ENST00000622776 SH2D6Q7Z4S9 175 aa15.98■□□□□ 0.15
CPSF1-214ENST00000622776 TMED6Q8WW62 240 aa15.98■□□□□ 0.15
CPSF1-214ENST00000622776 NMES1Q9C002 83 aa15.98■□□□□ 0.15
CPSF1-214ENST00000622776 GNRH2O43555 120 aa15.97■□□□□ 0.15
CPSF1-214ENST00000622776 PSCAO43653 123 aa15.97■□□□□ 0.15
CPSF1-214ENST00000622776 TIRAPP58753 221 aa15.97■□□□□ 0.15
CPSF1-214ENST00000622776 HAMPP81172 84 aa15.97■□□□□ 0.15
CPSF1-214ENST00000622776 HYLS1Q96M11 299 aa15.97■□□□□ 0.15
CPSF1-214ENST00000622776 IGLV5-52A0A0A0MRZ9 124 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 IGHV3-16A0A0C4DH30 117 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 IGHV3-38A0A0C4DH36 116 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 LRCOL1A6NCL2 159 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 FAM229AH3BQW9 127 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 KHDC3LQ587J8 217 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 FFAR4Q5NUL3 377 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 NHLRC2Q8NBF2 726 aa15.96■□□□□ 0.15
CPSF1-214ENST00000622776 TAS2R45P59539 299 aa15.95■□□□□ 0.14
CPSF1-214ENST00000622776 NTN5Q8WTR8 489 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-214ENST00000622776 ATP5SQ99766 215 aa15.95■□□□□ 0.14
CPSF1-214ENST00000622776 TMEM70Q9BUB7 260 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms