RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 UTF1Q5T230 341 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 NPIPB5A8MRT5 1133 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 PSCAO43653 123 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 SH2D1AO60880 128 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 MALP21145 153 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 HLA-DMBP28068 263 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 FOXI1Q12951 378 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 TEN1Q86WV5 123 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 PRO1854Q9UHT4 67 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 PLXNA2O75051 1894 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 J3KT08 172 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 RPL35AP18077 110 aaKnown RBP8.34□□□□□ -1.07
COL25A1-209ENST00000622134 WFDC2Q14508 124 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 Q6ZR03 302 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 EXOC3-AS1Q8N2X6 119 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 Q8N8P6 123 aa8.34□□□□□ -1.07
COL25A1-209ENST00000622134 OVOL3O00110 214 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 LOXL1Q08397 574 aaPredicted RBP8.33□□□□□ -1.08
COL25A1-209ENST00000622134 CNTFRP26992 372 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 HERV-K104P63124 156 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 LYPD6Q86Y78 171 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 PRSS29PA6NIE9 313 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 NDUFA4O00483 81 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 ATP6V0E1O15342 81 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 TMEM75Q8N9X5 138 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 GTF3C1Q12789 2109 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 OTOGLQ3ZCN5 2332 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 CTRLP40313 264 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 C10orf55Q5SWW7 151 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
COL25A1-209ENST00000622134 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
COL25A1-209ENST00000622134 RNASE1P07998 156 aaKnown RBP8.32□□□□□ -1.08
COL25A1-209ENST00000622134 RNASE2P10153 161 aaKnown RBP8.32□□□□□ -1.08
COL25A1-209ENST00000622134 RMI2Q96E14 147 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 HELZP42694 1942 aaKnown RBP8.32□□□□□ -1.08
COL25A1-209ENST00000622134 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 PPIFP30405 207 aaKnown RBP8.32□□□□□ -1.08
COL25A1-209ENST00000622134 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 DOCK10Q96BY6 2186 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 NDUFS7O75251 213 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 DEFB112Q30KQ8 113 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 IGHV4-61A0A0C4DH41 118 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 PDE6HQ13956 83 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 ZNF833PQ6ZTB9 187 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 HIVEP2P31629 2446 aa8.32□□□□□ -1.08
COL25A1-209ENST00000622134 IGHV4-30-2A0A087WSY4 118 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 IGHG4P01861 327 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 RHODO00212 210 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 DKK1O94907 266 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 ACYP1P07311 99 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 PCP2Q8IVA1 136 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 ZNF843Q8N446 348 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 GLMPQ8WWB7 406 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 TRBV25-1A0A075B6N4 114 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 HIST1H4AP62805 103 aaKnown RBP8.31□□□□□ -1.08
COL25A1-209ENST00000622134 FER1L5A0AVI2 2057 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 F8VRH5 84 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 DAD1P61803 113 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 FOXE3Q13461 319 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
COL25A1-209ENST00000622134 FAM120AOSQ5T036 256 aa8.31□□□□□ -1.08
COL25A1-209ENST00000622134 GRNP28799 593 aaKnown RBP8.3□□□□□ -1.08
COL25A1-209ENST00000622134 DEFB131AP59861 70 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 ANKRD29Q8N6D5 301 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 IGLV3-1P01715 115 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 FGF6P10767 208 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 PRR20EP86478 221 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 PRR20CP86479 221 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 PRR20DP86480 221 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 PRR20BP86481 221 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 PRR20AP86496 221 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 Q8NA96 180 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
COL25A1-209ENST00000622134 DPH3P1Q9H4G8 78 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 TMEM14BQ9NUH8 114 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 ANXA2RQ3ZCQ2 193 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
COL25A1-209ENST00000622134 PKIGQ9Y2B9 76 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 ABCA1O95477 2261 aa8.3□□□□□ -1.08
COL25A1-209ENST00000622134 TRGV1A0A0A0MS02 117 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 HLA-DRB4P13762 266 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 HLA-DRB4X5D2U9 266 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 VCYO14598 125 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 RNF183Q96D59 192 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 TMEM213A2RRL7 107 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 A0A1W2PNU3 283 aaPredicted RBP8.29□□□□□ -1.08
COL25A1-209ENST00000622134 CLPSL1A2RUU4 121 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 C2orf70A6NJV1 201 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 SRRM4A7MD48 611 aaKnown RBP8.29□□□□□ -1.08
COL25A1-209ENST00000622134 HS3ST6Q96QI5 342 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
COL25A1-209ENST00000622134 TMEM89A2RUT3 159 aa8.28□□□□□ -1.08
COL25A1-209ENST00000622134 C22orf46C9J442 243 aa8.28□□□□□ -1.08
COL25A1-209ENST00000622134 SPATA12Q7Z6I5 190 aa8.28□□□□□ -1.08
COL25A1-209ENST00000622134 IGKV2-40A0A087WW87 121 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms