RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 HTN1P15515 57 aa10.23□□□□□ -0.77
CBWD3-217ENST00000621474 EMP1P54849 157 aa10.23□□□□□ -0.77
CBWD3-217ENST00000621474 CST9LP1Q5W188 147 aa10.23□□□□□ -0.77
CBWD3-217ENST00000621474 Q6AWC8 147 aa10.23□□□□□ -0.77
CBWD3-217ENST00000621474 ZFAND6Q6FIF0 208 aa10.23□□□□□ -0.77
CBWD3-217ENST00000621474 PSG8Q9UQ74 426 aa10.23□□□□□ -0.77
CBWD3-217ENST00000621474 TRAV34A0A0B4J273 112 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 F6UZH7 168 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 IFNA7P01567 189 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 FLI1Q01543 452 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-217ENST00000621474 HIST1H2BAQ96A08 127 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 PYGO2Q9BRQ0 406 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 NIPSNAP3BQ9BS92 247 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 DKK2Q9UBU2 259 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 TENM2Q9NT68 2774 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 FAM222AQ5U5X8 452 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 TMEM263Q8WUH6 116 aaKnown RBP10.22□□□□□ -0.77
CBWD3-217ENST00000621474 C8orf49Q96NF6 230 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 TREM1Q9NP99 234 aa10.22□□□□□ -0.77
CBWD3-217ENST00000621474 K7EQM0 130 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 ZNF80P51504 273 aaPredicted RBP10.21□□□□□ -0.78
CBWD3-217ENST00000621474 PMS2P11Q13670 270 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 C12orf74Q32Q52 190 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 ZNF767PQ75MW2 155 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 PRNTQ86SH4 94 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 C11orf72Q8NBR9 251 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 LYPD6BQ8NI32 183 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 C16orf74Q96GX8 76 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 TCEAL7Q9BRU2 100 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 GNG13Q9P2W3 67 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 KLF12Q9Y4X4 402 aa10.21□□□□□ -0.78
CBWD3-217ENST00000621474 SCO2A0A1W2PP80 73 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 C11orf94C9JXX5 98 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 PPT1P50897 306 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 Q6ZTC4 211 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 Q86TA4 180 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 C2CD4CQ8TF44 421 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 MANBALQ9NQG1 85 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 TP53TG3Q9ULZ0 132 aa10.2□□□□□ -0.78
CBWD3-217ENST00000621474 CXorf65A6NEN9 183 aa10.19□□□□□ -0.78
CBWD3-217ENST00000621474 FBLL1A6NHQ2 334 aaKnown RBP10.19□□□□□ -0.78
CBWD3-217ENST00000621474 ZNF493Q6ZR52 646 aa10.19□□□□□ -0.78
CBWD3-217ENST00000621474 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 ANXA2RQ3ZCQ2 193 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 PHLDA1Q8WV24 401 aaPredicted RBP10.18□□□□□ -0.78
CBWD3-217ENST00000621474 TEX46H3BTG2 121 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 TMEM183BQ1AE95 376 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 MUC21Q5SSG8 566 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 TEX261Q6UWH6 196 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 EIF4E3Q8N5X7 224 aaKnown RBP10.18□□□□□ -0.78
CBWD3-217ENST00000621474 FMC1Q96HJ9 113 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 NDFIP1Q9BT67 221 aa10.18□□□□□ -0.78
CBWD3-217ENST00000621474 TRBV6-1A0A0K0K1D8 114 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 RGS13O14921 159 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 LTAP01374 205 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 BCL2P10415 239 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 SAPCD1Q5SSQ6 148 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 COX8CQ7Z4L0 72 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 C11orf52Q96A22 123 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 NOP10Q9NPE3 64 aaKnown RBP10.17□□□□□ -0.78
CBWD3-217ENST00000621474 GSN-AS1Q9NRJ2 163 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
CBWD3-217ENST00000621474 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
CBWD3-217ENST00000621474 CBY3A6NI87 242 aa10.16□□□□□ -0.78
CBWD3-217ENST00000621474 LYRM9A8MSI8 78 aa10.16□□□□□ -0.78
CBWD3-217ENST00000621474 GCGP01275 180 aa10.16□□□□□ -0.78
CBWD3-217ENST00000621474 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
CBWD3-217ENST00000621474 MEF2BQ02080 365 aaPredicted RBP10.16□□□□□ -0.78
CBWD3-217ENST00000621474 CEMP1Q6PRD7 247 aaPredicted RBP10.16□□□□□ -0.78
CBWD3-217ENST00000621474 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
CBWD3-217ENST00000621474 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
CBWD3-217ENST00000621474 TEX48A0A1B0GUV7 120 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 PFN1P07737 140 aaKnown RBP10.15□□□□□ -0.78
CBWD3-217ENST00000621474 AKR1C3P42330 323 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 CRIP1P50238 77 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 UBE2G1P62253 170 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 SMUG1Q53HV7 270 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 IBA57Q5T440 356 aaKnown RBP10.15□□□□□ -0.78
CBWD3-217ENST00000621474 LINC00612Q8N6U2 182 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 ZNF680Q8NEM1 530 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 TXNDC17Q9BRA2 123 aa10.15□□□□□ -0.78
CBWD3-217ENST00000621474 NUPR2A6NF83 97 aa10.15□□□□□ -0.79
CBWD3-217ENST00000621474 TCL1AP56279 114 aa10.15□□□□□ -0.79
CBWD3-217ENST00000621474 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.79
CBWD3-217ENST00000621474 MDFICQ9P1T7 246 aa10.15□□□□□ -0.79
CBWD3-217ENST00000621474 ZFP30Q9Y2G7 519 aa10.15□□□□□ -0.79
CBWD3-217ENST00000621474 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
CBWD3-217ENST00000621474 PCNPQ8WW12 178 aaKnown RBP10.14□□□□□ -0.79
CBWD3-217ENST00000621474 MLST8Q9BVC4 326 aa10.14□□□□□ -0.79
CBWD3-217ENST00000621474 VAX2Q9UIW0 290 aa10.14□□□□□ -0.79
CBWD3-217ENST00000621474 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
CBWD3-217ENST00000621474 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
CBWD3-217ENST00000621474 MUC4Q99102 2169 aa10.13□□□□□ -0.79
CBWD3-217ENST00000621474 SNURFLB1AK76 121 aa10.13□□□□□ -0.79
CBWD3-217ENST00000621474 GNRH2O43555 120 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms