RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 Q9H3A6 140 aa16.61■□□□□ 0.25
ATXN3-253ENST00000621269 A0A096LPF7 62 aa16.6■□□□□ 0.25
ATXN3-253ENST00000621269 RBAKDNA6NC62 111 aa16.6■□□□□ 0.25
ATXN3-253ENST00000621269 C16orf90A8MZG2 172 aa16.6■□□□□ 0.25
ATXN3-253ENST00000621269 TAS2R45P59539 299 aa16.6■□□□□ 0.25
ATXN3-253ENST00000621269 Q6ZQT7 251 aa16.6■□□□□ 0.25
ATXN3-253ENST00000621269 ST6GAL2Q96JF0 529 aa16.59■□□□□ 0.25
ATXN3-253ENST00000621269 MRPL16Q9NX20 251 aaKnown RBP16.59■□□□□ 0.25
ATXN3-253ENST00000621269 DYNC1H1Q14204 4646 aaKnown RBP16.58■□□□□ 0.25
ATXN3-253ENST00000621269 A0A1W2PPQ1 181 aa16.58■□□□□ 0.24
ATXN3-253ENST00000621269 ZNF415Q09FC8 603 aa16.58■□□□□ 0.24
ATXN3-253ENST00000621269 DNAH11Q96DT5 4516 aa16.58■□□□□ 0.24
ATXN3-253ENST00000621269 PAX4O43316 350 aa16.57■□□□□ 0.24
ATXN3-253ENST00000621269 IGHV3-53P01767 116 aa16.57■□□□□ 0.24
ATXN3-253ENST00000621269 ZNF266Q14584 549 aa16.57■□□□□ 0.24
ATXN3-253ENST00000621269 KRTAP1-5Q9BYS1 174 aa16.57■□□□□ 0.24
ATXN3-253ENST00000621269 MBD2Q9UBB5 411 aa16.57■□□□□ 0.24
ATXN3-253ENST00000621269 MUC21Q5SSG8 566 aa16.56■□□□□ 0.24
ATXN3-253ENST00000621269 HYLS1Q96M11 299 aa16.56■□□□□ 0.24
ATXN3-253ENST00000621269 ICOSQ9Y6W8 199 aa16.56■□□□□ 0.24
ATXN3-253ENST00000621269 DIRC3C9JPN6 131 aa16.55■□□□□ 0.24
ATXN3-253ENST00000621269 SLAQ13239 276 aa16.55■□□□□ 0.24
ATXN3-253ENST00000621269 PRO0255Q9UI72 69 aa16.55■□□□□ 0.24
ATXN3-253ENST00000621269 LENEPQ9Y5L5 61 aa16.55■□□□□ 0.24
ATXN3-253ENST00000621269 ACOT6Q3I5F7 207 aaPredicted RBP16.54■□□□□ 0.24
ATXN3-253ENST00000621269 FAM74A1Q5RGS3 127 aa16.54■□□□□ 0.24
ATXN3-253ENST00000621269 CMTM2Q8TAZ6 248 aa16.54■□□□□ 0.24
ATXN3-253ENST00000621269 HHLA3Q9XRX5 114 aa16.54■□□□□ 0.24
ATXN3-253ENST00000621269 A0A1W2PPV4 95 aa16.53■□□□□ 0.24
ATXN3-253ENST00000621269 BTF3P20290 206 aaKnown RBP16.53■□□□□ 0.24
ATXN3-253ENST00000621269 FAM159AQ6UWV7 190 aa16.53■□□□□ 0.24
ATXN3-253ENST00000621269 OTORQ9NRC9 128 aa16.53■□□□□ 0.24
ATXN3-253ENST00000621269 PGPA6NDG6 321 aa16.52■□□□□ 0.24
ATXN3-253ENST00000621269 EIF3GO75821 320 aaKnown RBP eCLIP16.52■□□□□ 0.24
ATXN3-253ENST00000621269 Q6AWC8 147 aa16.52■□□□□ 0.24
ATXN3-253ENST00000621269 C8orf49Q96NF6 230 aa16.52■□□□□ 0.24
ATXN3-253ENST00000621269 WFDC1Q9HC57 220 aa16.52■□□□□ 0.24
ATXN3-253ENST00000621269 MDFICQ9P1T7 246 aa16.52■□□□□ 0.24
ATXN3-253ENST00000621269 RPH3ALQ9UNE2 315 aa16.52■□□□□ 0.24
ATXN3-253ENST00000621269 SIVA1O15304 175 aa16.51■□□□□ 0.23
ATXN3-253ENST00000621269 CRYBA4P53673 196 aa16.51■□□□□ 0.23
ATXN3-253ENST00000621269 FHL2Q14192 279 aa16.51■□□□□ 0.23
ATXN3-253ENST00000621269 PQLC2Q6ZP29 291 aa16.51■□□□□ 0.23
ATXN3-253ENST00000621269 TMED6Q8WW62 240 aa16.51■□□□□ 0.23
ATXN3-253ENST00000621269 TRGV11A0A075B6L2 103 aa16.5■□□□□ 0.23
ATXN3-253ENST00000621269 TRGV4A0A0C4DH28 118 aa16.5■□□□□ 0.23
ATXN3-253ENST00000621269 TMEM183BQ1AE95 376 aa16.5■□□□□ 0.23
ATXN3-253ENST00000621269 SPATA12Q7Z6I5 190 aa16.5■□□□□ 0.23
ATXN3-253ENST00000621269 TMEM183AQ8IXX5 376 aa16.5■□□□□ 0.23
ATXN3-253ENST00000621269 SPXQ9BT56 116 aa16.5■□□□□ 0.23
ATXN3-253ENST00000621269 MRPL23Q16540 153 aaKnown RBP16.49■□□□□ 0.23
ATXN3-253ENST00000621269 NAGKQ9UJ70 344 aa16.49■□□□□ 0.23
ATXN3-253ENST00000621269 CDK2AP2O75956 126 aa16.48■□□□□ 0.23
ATXN3-253ENST00000621269 NXPH4O95158 308 aa16.48■□□□□ 0.23
ATXN3-253ENST00000621269 OR10G4Q8NGN3 311 aa16.48■□□□□ 0.23
ATXN3-253ENST00000621269 OR10G9Q8NGN4 311 aa16.48■□□□□ 0.23
ATXN3-253ENST00000621269 OR10G7Q8NGN6 311 aa16.48■□□□□ 0.23
ATXN3-253ENST00000621269 RAB2AP61019 212 aa16.47■□□□□ 0.23
ATXN3-253ENST00000621269 GOLT1AQ6ZVE7 132 aa16.47■□□□□ 0.23
ATXN3-253ENST00000621269 ARL6IP6Q8N6S5 226 aa16.47■□□□□ 0.23
ATXN3-253ENST00000621269 RASL10AQ92737 203 aa16.47■□□□□ 0.23
ATXN3-253ENST00000621269 LINC00315P59091 139 aa16.46■□□□□ 0.23
ATXN3-253ENST00000621269 LYPD5Q6UWN5 251 aa16.46■□□□□ 0.23
ATXN3-253ENST00000621269 NEGR1Q7Z3B1 354 aa16.46■□□□□ 0.23
ATXN3-253ENST00000621269 IQCF2Q8IXL9 164 aa16.46■□□□□ 0.23
ATXN3-253ENST00000621269 ALG5Q9Y673 324 aa16.46■□□□□ 0.23
ATXN3-253ENST00000621269 RYR1P21817 5038 aa16.45■□□□□ 0.22
ATXN3-253ENST00000621269 HMGB3O15347 200 aaKnown RBP16.45■□□□□ 0.22
ATXN3-253ENST00000621269 SFTA3P0C7M3 94 aa16.45■□□□□ 0.22
ATXN3-253ENST00000621269 TDRG1Q3Y452 100 aa16.45■□□□□ 0.22
ATXN3-253ENST00000621269 PCNPQ8WW12 178 aaKnown RBP16.45■□□□□ 0.22
ATXN3-253ENST00000621269 ZNF479Q96JC4 524 aa16.45■□□□□ 0.22
ATXN3-253ENST00000621269 TRAV21A0A0B4J279 112 aa16.44■□□□□ 0.22
ATXN3-253ENST00000621269 TREM1Q9NP99 234 aa16.44■□□□□ 0.22
ATXN3-253ENST00000621269 GNRH2O43555 120 aa16.43■□□□□ 0.22
ATXN3-253ENST00000621269 SRIP30626 198 aa16.43■□□□□ 0.22
ATXN3-253ENST00000621269 BATF3Q9NR55 127 aa16.43■□□□□ 0.22
ATXN3-253ENST00000621269 TRAV8-1A0A0A6YYK1 113 aa16.42■□□□□ 0.22
ATXN3-253ENST00000621269 F6UZH7 168 aa16.42■□□□□ 0.22
ATXN3-253ENST00000621269 K7EQD1 137 aa16.42■□□□□ 0.22
ATXN3-253ENST00000621269 ORM1P02763 201 aa16.42■□□□□ 0.22
ATXN3-253ENST00000621269 CDC34P49427 236 aaPredicted RBP16.42■□□□□ 0.22
ATXN3-253ENST00000621269 GNG5P63218 68 aa16.42■□□□□ 0.22
ATXN3-253ENST00000621269 MUC4Q99102 2169 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 TRAV9-2A0A087WT02 112 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 M0R2P5 195 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 ARL14EPLP0DKL9 152 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 GYPEP15421 78 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 KRTAP10-2P60368 255 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 MAPKAPK5-AS1Q8N8E1 139 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 HSD17B11Q8NBQ5 300 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 OR4C5Q8NGB2 326 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 KCNS1Q96KK3 526 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 NDFIP1Q9BT67 221 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 SDF2L1Q9HCN8 221 aa16.41■□□□□ 0.22
ATXN3-253ENST00000621269 TRAV4A0A0B4J268 109 aa16.4■□□□□ 0.22
ATXN3-253ENST00000621269 IGHV3-16A0A0C4DH30 117 aa16.4■□□□□ 0.22
ATXN3-253ENST00000621269 OR2G3Q8NGZ4 309 aa16.4■□□□□ 0.22
ATXN3-253ENST00000621269 TVP23CQ96ET8 276 aa16.4■□□□□ 0.22
ATXN3-253ENST00000621269 KRTAP4-5Q9BYR2 181 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms