RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 GCSAMLQ5JQS6 135 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 MIR17HGQ75NE6 70 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 LINC00305Q7Z4B0 112 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 BPIFA4PQ86YQ2 179 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 C15orf54Q8N8G6 183 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 NECAP1Q8NC96 275 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 OR5T1Q8NG75 326 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 OR4F17Q8NGA8 305 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 C17orf50Q8WW18 174 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 BTF3L4Q96K17 158 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 OR5B12Q96R08 314 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 TENM1Q9UKZ4 2725 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
VPS29-212ENST00000621131 IGKV1D-37A0A075B6S9 117 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 IGKV1OR2-108A0A075B7D4 117 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 A0A087WWC5 75 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 A0A096LNT2 108 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 A0A0G2JLM5 398 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 C7orf77A4D0Y5 90 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 FAM74A7A6NL05 159 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 K7EIM0 57 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 K7EQM0 130 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 SCO1O75880 301 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 IGHV3-48P01763 117 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 TRGV3P03979 118 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 IL4P05112 153 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 S100A9P06702 114 aaKnown RBP3.49□□□□□ -1.85
VPS29-212ENST00000621131 GIG44P09565 113 aaPredicted RBP3.49□□□□□ -1.85
VPS29-212ENST00000621131 OR10J4P0C629 311 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 IGLC1P0CG04 106 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 PAX6P26367 422 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 CNN1P51911 297 aaKnown RBP3.49□□□□□ -1.85
VPS29-212ENST00000621131 MFAP2P55001 183 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 TPPP2P59282 170 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 UBE2G1P62253 170 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 RHOGP84095 191 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 ZNF90Q03938 601 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 ADIRFQ15847 76 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 SPATA31B1PQ5VZV4 182 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 KCNIP4Q6PIL6 250 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 ZNF600Q6ZNG1 722 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 CMTM2Q8TAZ6 248 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 USMG5Q96IX5 58 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 GPR82Q96P67 336 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 FOXC2Q99958 501 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 HSPB9Q9BQS6 159 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 C20orf24Q9BUV8 137 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 SLC25A2Q9BXI2 301 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 BIN3Q9NQY0 253 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 RABAC1Q9UI14 185 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 VPREB3Q9UKI3 123 aa3.49□□□□□ -1.85
VPS29-212ENST00000621131 TMEM89A2RUT3 159 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 OR2T8A6NH00 312 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 C9JQL5 133 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 H3BRN7 92 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 H7BYZ3 331 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 CLDN34H7C241 214 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 TGOLN2O43493 480 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 BRI3O95415 125 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 IGHG2P01859 326 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 IGF1P05019 195 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 SLC25A5P05141 298 aaKnown RBP3.48□□□□□ -1.85
VPS29-212ENST00000621131 HIST1H1EP10412 219 aaKnown RBP3.48□□□□□ -1.85
VPS29-212ENST00000621131 RPL7P18124 248 aaKnown RBP3.48□□□□□ -1.85
VPS29-212ENST00000621131 BMI1P35226 326 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 IER3P46695 156 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 CSN1S1P47710 185 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 ATP5G3P48201 142 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 GNG4P50150 75 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 MEOX2P50222 304 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 PSG9Q00887 426 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 DEFB112Q30KQ8 113 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 KLF17Q5JT82 389 aaPredicted RBP3.48□□□□□ -1.85
VPS29-212ENST00000621131 MUC21Q5SSG8 566 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 C19orf35Q6ZS72 473 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 CBLN2Q8IUK8 224 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 LYPD1Q8N2G4 141 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 TMEM86BQ8N661 226 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 WFDC11Q8NEX6 87 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 ZNF502Q8TBZ5 544 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 BLNKQ8WV28 456 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 TMEM37Q8WXS4 190 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 HIST1H2BAQ96A08 127 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 METTL26Q96S19 204 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 SHANK2-AS3Q9BTD1 123 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 CHRDL1Q9BU40 450 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 SCRT1Q9BWW7 348 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 SLC25A39Q9BZJ4 359 aaPredicted RBP3.48□□□□□ -1.85
VPS29-212ENST00000621131 TUBA4BQ9H853 241 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 TMEM14CQ9P0S9 112 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 DHRS4-AS1Q9P1J3 65 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 LY96Q9Y6Y9 160 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 CMYA5Q8N3K9 4069 aa3.48□□□□□ -1.85
VPS29-212ENST00000621131 TRBV9A0A0B4J1U6 114 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 TRAV5A0A0B4J249 113 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 SERTM2A0A1B0GWG4 89 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 WI2-2373I1.2A0A1W2PRP0 233 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 PSMB11A5LHX3 300 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 HELTA6NFD8 242 aa3.47□□□□□ -1.85
VPS29-212ENST00000621131 FBLL1A6NHQ2 334 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms