RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 SIGMAR1Q99720 223 aa7.18□□□□□ -1.26
RBFOX1-223ENST00000620507 VCX2Q9H322 139 aa7.18□□□□□ -1.26
RBFOX1-223ENST00000620507 OVOL1O14753 267 aa7.18□□□□□ -1.26
RBFOX1-223ENST00000620507 IGHV4-39P01824 125 aa7.18□□□□□ -1.26
RBFOX1-223ENST00000620507 NBEAQ8NFP9 2946 aa7.18□□□□□ -1.26
RBFOX1-223ENST00000620507 BUB3O43684 328 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 BCL6BQ8N143 479 aaPredicted RBP7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 FOXC2Q99958 501 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 MRPS16Q9Y3D3 137 aaKnown RBP7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 ATP5LO75964 103 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 SNRPD3P62318 126 aaKnown RBP7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 TMEM160Q9NX00 188 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 IGHV4-61A0A0C4DH41 118 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 TRBV6-1A0A0K0K1D8 114 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 LINC00310P59036 64 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 LMO4P61968 165 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 MRGPRG-AS1Q2M3A8 158 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 MPV17L2Q567V2 206 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 PRSS57Q6UWY2 283 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 LINC00477Q96M19 166 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 SIGLEC8Q9NYZ4 499 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 OR1N2Q8NGR9 330 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 ORAOV1Q8WV07 137 aa7.17□□□□□ -1.26
RBFOX1-223ENST00000620507 LINC00173Q6ZV60 143 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 Q6ZVH6 145 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 RHPN1-AS1Q9BWJ2 59 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 OVOL3O00110 214 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 WFDC12Q8WWY7 111 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 AGPAT4-IT1Q9H0P7 198 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 PAX1P15863 534 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 DSCR9P59020 149 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 EBI3Q14213 229 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 FAM74A4Q5TZK3 123 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 C5orf56Q8N8D9 126 aa7.16□□□□□ -1.26
RBFOX1-223ENST00000620507 TRAV26-1A0A087WT03 109 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 TNFRSF6BO95407 300 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 GCSHP23434 173 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 BOD1L1Q8NFC6 3051 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 NPIPB6E9PJ23 425 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 NPYP01303 97 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 IGLV2-11P01706 119 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 ODF1Q14990 250 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 AMMECR1LQ6DCA0 310 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 PIP4P2Q8N4L2 257 aa7.15□□□□□ -1.26
RBFOX1-223ENST00000620507 LINC01548A6NM66 108 aa7.15□□□□□ -1.27
RBFOX1-223ENST00000620507 VWC2LB2RUY7 222 aa7.15□□□□□ -1.27
RBFOX1-223ENST00000620507 C19orf84I3L1E1 186 aa7.15□□□□□ -1.27
RBFOX1-223ENST00000620507 SRSF1Q07955 248 aaKnown RBP eCLIP7.15□□□□□ -1.27
RBFOX1-223ENST00000620507 RAB37Q96AX2 223 aa7.15□□□□□ -1.27
RBFOX1-223ENST00000620507 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.27
RBFOX1-223ENST00000620507 A0A087X0K7 114 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 PRAC2D3DTV9 90 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 NDUFA4O00483 81 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 ATP6V0BQ99437 205 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 ZNF747Q9BV97 191 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 TRAV8-6A0A0B4J262 113 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 IGHV4-38-2P0DP08 117 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 CRYBA4P53673 196 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 SCGB3A1Q96QR1 104 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 GAGE12BA1L429 117 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 C2orf70A6NJV1 201 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 PPP1R17O96001 155 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 PSMG4Q5JS54 123 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 STPG4Q8N801 248 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 SS18L2Q9UHA2 77 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 RNF114Q9Y508 228 aa7.14□□□□□ -1.27
RBFOX1-223ENST00000620507 CD7P09564 240 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 Q8N6K4 173 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 OR2K2Q8NGT1 345 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 DYNLRB2Q8TF09 96 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 TMEM158Q8WZ71 300 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 MSRB1Q9NZV6 116 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 PEF1Q9UBV8 284 aaKnown RBP7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 RBAKDNA6NC62 111 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 CRIP1P50238 77 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 LAGE3Q14657 143 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 KIR2DL4Q99706 377 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 AKAP13Q12802 2813 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 USP9YO00507 2555 aaPredicted RBP7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 MYO18BQ8IUG5 2567 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 IGHV4-30-2A0A087WSY4 118 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 HERV-K104P63124 156 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 SPXQ9BT56 116 aa7.13□□□□□ -1.27
RBFOX1-223ENST00000620507 DPM2O94777 84 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 ZNF688P0C7X2 276 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 BLCAPP62952 87 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 C14orf178Q8N769 122 aaPredicted RBP7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 MAPK1IP1LQ8NDC0 245 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 C10orf105Q8TEF2 133 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 A0A1W2PPR1 153 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 SLC25A16P16260 332 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 GATA3P23771 443 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 ZNF56Q15929 161 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 GEMIN7Q9H840 131 aaKnown RBP7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms