RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 APOC3P02656 99 aa16.47■□□□□ 0.23
CBWD3-213ENST00000618217 SRP19P09132 144 aaKnown RBP16.47■□□□□ 0.23
CBWD3-213ENST00000618217 PRR9Q5T870 116 aa16.47■□□□□ 0.23
CBWD3-213ENST00000618217 GFI1BQ5VTD9 330 aa16.47■□□□□ 0.23
CBWD3-213ENST00000618217 C1orf158Q8N1D5 194 aa16.47■□□□□ 0.23
CBWD3-213ENST00000618217 FMC1Q96HJ9 113 aa16.47■□□□□ 0.23
CBWD3-213ENST00000618217 TRBV6-1A0A0K0K1D8 114 aa16.46■□□□□ 0.23
CBWD3-213ENST00000618217 RBMY1A1P0DJD3 496 aaKnown RBP16.46■□□□□ 0.23
CBWD3-213ENST00000618217 RBMY1CP0DJD4 496 aa16.46■□□□□ 0.23
CBWD3-213ENST00000618217 RBMY1FQ15415 496 aaKnown RBP16.46■□□□□ 0.23
CBWD3-213ENST00000618217 TMEM183BQ1AE95 376 aa16.46■□□□□ 0.23
CBWD3-213ENST00000618217 ZNF705AQ6ZN79 300 aaPredicted RBP16.46■□□□□ 0.23
CBWD3-213ENST00000618217 SEC11CQ9BY50 192 aa16.46■□□□□ 0.23
CBWD3-213ENST00000618217 INSP01308 110 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 CEBPGP53567 150 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 PRNTQ86SH4 94 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 Q86TA4 180 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 J3KRW8 73 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 GPX1P07203 203 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 AKR1C3P42330 323 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 C10orf91Q5T1B1 145 aa16.45■□□□□ 0.22
CBWD3-213ENST00000618217 CARHSP1Q9Y2V2 147 aaKnown RBP16.45■□□□□ 0.22
CBWD3-213ENST00000618217 DERL1Q9BUN8 251 aa16.44■□□□□ 0.22
CBWD3-213ENST00000618217 TGP01266 2768 aa16.44■□□□□ 0.22
CBWD3-213ENST00000618217 C7orf71A4D174 169 aa16.43■□□□□ 0.22
CBWD3-213ENST00000618217 NDUFS6O75380 124 aaKnown RBP16.43■□□□□ 0.22
CBWD3-213ENST00000618217 ZNF324O75467 553 aaPredicted RBP16.43■□□□□ 0.22
CBWD3-213ENST00000618217 LTAP01374 205 aa16.43■□□□□ 0.22
CBWD3-213ENST00000618217 S100A9P06702 114 aaKnown RBP16.43■□□□□ 0.22
CBWD3-213ENST00000618217 RNASE4P34096 147 aaKnown RBP16.43■□□□□ 0.22
CBWD3-213ENST00000618217 BTN1A1Q13410 526 aa16.43■□□□□ 0.22
CBWD3-213ENST00000618217 C8orf49Q96NF6 230 aa16.43■□□□□ 0.22
CBWD3-213ENST00000618217 C20orf144Q9BQM9 153 aa16.43■□□□□ 0.22
CBWD3-213ENST00000618217 ZMAT4Q9H898 229 aa16.43■□□□□ 0.22
CBWD3-213ENST00000618217 X6R8D5 127 aa16.43■□□□□ 0.22
CBWD3-213ENST00000618217 RPL35P42766 123 aaKnown RBP16.42■□□□□ 0.22
CBWD3-213ENST00000618217 UBE2G1P62253 170 aa16.42■□□□□ 0.22
CBWD3-213ENST00000618217 SAPCD1Q5SSQ6 148 aa16.42■□□□□ 0.22
CBWD3-213ENST00000618217 Q6ZQT7 251 aa16.42■□□□□ 0.22
CBWD3-213ENST00000618217 TRAV12-3A0A0B4J271 114 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 TMEM250H0YL14 139 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 SOHLH1Q5JUK2 328 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 COX8CQ7Z4L0 72 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 OR11H2Q8NH07 326 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 NDFIP1Q9BT67 221 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 ZFP30Q9Y2G7 519 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 GOLT1BQ9Y3E0 138 aa16.41■□□□□ 0.22
CBWD3-213ENST00000618217 TAS2R60P59551 318 aa16.4■□□□□ 0.22
CBWD3-213ENST00000618217 Q6AWC8 147 aa16.4■□□□□ 0.22
CBWD3-213ENST00000618217 TMEM256Q8N2U0 113 aa16.4■□□□□ 0.22
CBWD3-213ENST00000618217 HUWE1Q7Z6Z7 4374 aaKnown RBP16.4■□□□□ 0.22
CBWD3-213ENST00000618217 ZNF80P51504 273 aaPredicted RBP16.39■□□□□ 0.21
CBWD3-213ENST00000618217 NEU1Q99519 415 aa16.39■□□□□ 0.21
CBWD3-213ENST00000618217 STAB2Q8WWQ8 2551 aa16.38■□□□□ 0.21
CBWD3-213ENST00000618217 IGHV3OR16-12A0A075B7B8 117 aa16.38■□□□□ 0.21
CBWD3-213ENST00000618217 SVBPQ8N300 66 aa16.38■□□□□ 0.21
CBWD3-213ENST00000618217 MLST8Q9BVC4 326 aa16.38■□□□□ 0.21
CBWD3-213ENST00000618217 TRBV20OR9-2A0A075B6H5 130 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 SMUG1Q53HV7 270 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 TMEM183AQ8IXX5 376 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 TMEM208Q9BTX3 173 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 H7BYZ3 331 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 PRM2P04554 102 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 BAGE2Q86Y30 109 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 LINC01587Q99440 93 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 NIPSNAP3BQ9BS92 247 aa16.37■□□□□ 0.21
CBWD3-213ENST00000618217 SMIM9A6NGZ8 99 aa16.36■□□□□ 0.21
CBWD3-213ENST00000618217 GCGP01275 180 aa16.36■□□□□ 0.21
CBWD3-213ENST00000618217 Q8NAQ8 132 aa16.36■□□□□ 0.21
CBWD3-213ENST00000618217 ZC2HC1AQ96GY0 325 aa16.36■□□□□ 0.21
CBWD3-213ENST00000618217 SCO1O75880 301 aa16.35■□□□□ 0.21
CBWD3-213ENST00000618217 CRIP1P50238 77 aa16.35■□□□□ 0.21
CBWD3-213ENST00000618217 CENPWQ5EE01 88 aa16.35■□□□□ 0.21
CBWD3-213ENST00000618217 PARLQ9H300 379 aa16.35■□□□□ 0.21
CBWD3-213ENST00000618217 U3KQK5 164 aa16.35■□□□□ 0.21
CBWD3-213ENST00000618217 IGLV2-8P01709 118 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 MIFP14174 115 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 ATRAIDQ6UW56 229 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 NHLRC2Q8NBF2 726 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 PYGO2Q9BRQ0 406 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 LINC00467Q9BRT7 94 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 TRAV21A0A0B4J279 112 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 ZNF705GA8MUZ8 300 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-213ENST00000618217 SNAPINO95295 136 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 PFN1P07737 140 aaKnown RBP16.34■□□□□ 0.21
CBWD3-213ENST00000618217 ZNF674Q2M3X9 581 aa16.34■□□□□ 0.21
CBWD3-213ENST00000618217 AZU1P20160 251 aa16.33■□□□□ 0.2
CBWD3-213ENST00000618217 C11orf21Q9P2W6 132 aa16.33■□□□□ 0.2
CBWD3-213ENST00000618217 IGHV4-28A0A0C4DH34 117 aa16.32■□□□□ 0.2
CBWD3-213ENST00000618217 ZNF727A8MUV8 499 aa16.32■□□□□ 0.2
CBWD3-213ENST00000618217 SMIM7Q9BQ49 75 aa16.32■□□□□ 0.2
CBWD3-213ENST00000618217 C9JCJ5 164 aa16.31■□□□□ 0.2
CBWD3-213ENST00000618217 M0R036 132 aa16.31■□□□□ 0.2
CBWD3-213ENST00000618217 GNG4P50150 75 aa16.31■□□□□ 0.2
CBWD3-213ENST00000618217 RRN3P1Q2M238 152 aa16.31■□□□□ 0.2
CBWD3-213ENST00000618217 CLRN3Q8NCR9 226 aa16.31■□□□□ 0.2
CBWD3-213ENST00000618217 SMIM12Q96EX1 92 aa16.31■□□□□ 0.2
CBWD3-213ENST00000618217 IGHV1OR15-1A0A075B7D0 117 aa16.3■□□□□ 0.2
CBWD3-213ENST00000618217 PGPEP1LA6NFU8 196 aa16.3■□□□□ 0.2
CBWD3-213ENST00000618217 FABP5P3A8MUU1 101 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms