RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 IGFL4Q6B9Z1 124 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 RNF182Q8N6D2 247 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 OR10J6PQ8NGY7 276 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 BLNKQ8WV28 456 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 SAT2Q96F10 170 aaPredicted RBP8.36□□□□□ -1.07
COL4A2-210ENST00000617564 ZNF503Q96F45 646 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 UPK3BQ9BT76 320 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 Q9H3A6 140 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 Q9H8V8 135 aa8.36□□□□□ -1.07
COL4A2-210ENST00000617564 TIMM8BQ9Y5J9 83 aaPredicted RBP8.36□□□□□ -1.07
COL4A2-210ENST00000617564 SLC17A3O00476 420 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 OR10J4P0C629 311 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 SEC11BP0C7V7 166 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 STOML3Q8TAV4 291 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 RAB24Q969Q5 203 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 LINC01587Q99440 93 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 KRTAP4-8Q9BYQ9 185 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 AAMDCQ9H7C9 122 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 PRELID1Q9Y255 219 aa8.35□□□□□ -1.07
COL4A2-210ENST00000617564 TRAV12-2A0A075B6T6 113 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 CTXND1A0A1B0GTU2 59 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 STAG3L2P0CL84 134 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 STAG3L3P0CL85 134 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 HIST1H1AQ02539 215 aaPredicted RBP8.34□□□□□ -1.07
COL4A2-210ENST00000617564 EIF5AL1Q6IS14 154 aaKnown RBP8.34□□□□□ -1.07
COL4A2-210ENST00000617564 C9orf62Q8N4C0 152 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 RXFP4Q8TDU9 374 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 TMEM263Q8WUH6 116 aaKnown RBP8.34□□□□□ -1.07
COL4A2-210ENST00000617564 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
COL4A2-210ENST00000617564 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
COL4A2-210ENST00000617564 UMAD1C9J7I0 102 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 HMGB3O15347 200 aaKnown RBP8.33□□□□□ -1.08
COL4A2-210ENST00000617564 EIF3GO75821 320 aaKnown RBP eCLIP8.33□□□□□ -1.08
COL4A2-210ENST00000617564 NDUFB4O95168 129 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 CXorf1O96002 111 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 ARL14EPLP0DKL9 152 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 KRTAP10-2P60368 255 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 XP32Q5T750 250 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 SLC51BQ86UW2 128 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 LYPD1Q8N2G4 141 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 RNASE8Q8TDE3 154 aaKnown RBP8.33□□□□□ -1.08
COL4A2-210ENST00000617564 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
COL4A2-210ENST00000617564 C20orf144Q9BQM9 153 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 PPP1R14DQ9NXH3 145 aa8.33□□□□□ -1.08
COL4A2-210ENST00000617564 H3BNG1 76 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 GCHFRP30047 84 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 CDKN1BP46527 198 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 ICAM4Q14773 271 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 DPPA3Q6W0C5 159 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 LINC00612Q8N6U2 182 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 TMED6Q8WW62 240 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 PHYHIPLQ96FC7 376 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 NOP10Q9NPE3 64 aaKnown RBP8.32□□□□□ -1.08
COL4A2-210ENST00000617564 TMEM167BQ9NRX6 74 aa8.32□□□□□ -1.08
COL4A2-210ENST00000617564 MRPS16Q9Y3D3 137 aaKnown RBP8.32□□□□□ -1.08
COL4A2-210ENST00000617564 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
COL4A2-210ENST00000617564 TRAV26-1A0A087WT03 109 aa8.31□□□□□ -1.08
COL4A2-210ENST00000617564 H7BYZ3 331 aa8.31□□□□□ -1.08
COL4A2-210ENST00000617564 CSN1S1P47710 185 aa8.31□□□□□ -1.08
COL4A2-210ENST00000617564 RANP62826 216 aaKnown RBP8.31□□□□□ -1.08
COL4A2-210ENST00000617564 FAM74A1Q5RGS3 127 aa8.31□□□□□ -1.08
COL4A2-210ENST00000617564 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
COL4A2-210ENST00000617564 OTORQ9NRC9 128 aa8.31□□□□□ -1.08
COL4A2-210ENST00000617564 MAP1LC3B2A6NCE7 125 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 PRAC2D3DTV9 90 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 M0R3E3 92 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 HTN1P15515 57 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 RAB5CP51148 216 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 OR5I1Q13606 314 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 ZNF726P1Q15940 193 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 Q5VSD8 79 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 IQCF2Q8IXL9 164 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 SYT8Q8NBV8 401 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 FAM213BQ8TBF2 198 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 SUN5Q8TC36 379 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 MAP1LC3BQ9GZQ8 125 aa8.3□□□□□ -1.08
COL4A2-210ENST00000617564 NKX2-5P52952 324 aaPredicted RBP8.29□□□□□ -1.08
COL4A2-210ENST00000617564 ESRGQ1W209 222 aa8.29□□□□□ -1.08
COL4A2-210ENST00000617564 CCDC28AQ8IWP9 274 aa8.29□□□□□ -1.08
COL4A2-210ENST00000617564 CMTM2Q8TAZ6 248 aa8.29□□□□□ -1.08
COL4A2-210ENST00000617564 A0A0J9YY99 117 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 PGPA6NDG6 321 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 PRB4P10163 310 aaPredicted RBP8.28□□□□□ -1.08
COL4A2-210ENST00000617564 FHITP49789 147 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 FGF8P55075 233 aaPredicted RBP8.28□□□□□ -1.08
COL4A2-210ENST00000617564 ARL6IP6Q8N6S5 226 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 FRZBQ92765 325 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 PGPEP1Q9NXJ5 209 aa8.28□□□□□ -1.08
COL4A2-210ENST00000617564 A0A1W2PRE2 83 aa8.27□□□□□ -1.09
COL4A2-210ENST00000617564 SNURFLB1AK76 121 aa8.27□□□□□ -1.09
COL4A2-210ENST00000617564 NPIPB6E9PJ23 425 aa8.27□□□□□ -1.09
COL4A2-210ENST00000617564 H2AFB1P0C5Y9 115 aa8.27□□□□□ -1.09
COL4A2-210ENST00000617564 HOXA5P20719 270 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms