RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 C8orf49Q96NF6 230 aa11.35□□□□□ -0.59
PCDHGC3-204ENST00000617222 GOLT1BQ9Y3E0 138 aa11.35□□□□□ -0.59
PCDHGC3-204ENST00000617222 TRBV6-1A0A0K0K1D8 114 aa11.34□□□□□ -0.59
PCDHGC3-204ENST00000617222 RGS13O14921 159 aa11.34□□□□□ -0.59
PCDHGC3-204ENST00000617222 RPL35P42766 123 aaKnown RBP11.34□□□□□ -0.59
PCDHGC3-204ENST00000617222 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
PCDHGC3-204ENST00000617222 LINC01587Q99440 93 aa11.34□□□□□ -0.59
PCDHGC3-204ENST00000617222 TMEM208Q9BTX3 173 aa11.34□□□□□ -0.59
PCDHGC3-204ENST00000617222 DERL1Q9BUN8 251 aa11.34□□□□□ -0.59
PCDHGC3-204ENST00000617222 RAB19A4D1S5 217 aa11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 SRSF3P84103 164 aaKnown RBP11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 PEA15Q15121 130 aa11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 ZNF705AQ6ZN79 300 aaPredicted RBP11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 NIPSNAP3BQ9BS92 247 aa11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 ZFP30Q9Y2G7 519 aa11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
PCDHGC3-204ENST00000617222 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 LTAP01374 205 aa11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 CEBPGP53567 150 aa11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 TAS2R60P59551 318 aa11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 SMUG1Q53HV7 270 aa11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 Q6ZQT7 251 aa11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 C20orf144Q9BQM9 153 aa11.32□□□□□ -0.6
PCDHGC3-204ENST00000617222 C9JQL5 133 aa11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 NDUFS6O75380 124 aaKnown RBP11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 GCGP01275 180 aa11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 PRM2P04554 102 aa11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 TMEM256Q8N2U0 113 aa11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 NHLRC2Q8NBF2 726 aa11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 X6R8D5 127 aa11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
PCDHGC3-204ENST00000617222 ZNF705GA8MUZ8 300 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-204ENST00000617222 H7BYZ3 331 aa11.3□□□□□ -0.6
PCDHGC3-204ENST00000617222 HTN1P15515 57 aa11.3□□□□□ -0.6
PCDHGC3-204ENST00000617222 ZNF80P51504 273 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-204ENST00000617222 ZNF674Q2M3X9 581 aa11.3□□□□□ -0.6
PCDHGC3-204ENST00000617222 Q6AWC8 147 aa11.3□□□□□ -0.6
PCDHGC3-204ENST00000617222 TMEM183AQ8IXX5 376 aa11.3□□□□□ -0.6
PCDHGC3-204ENST00000617222 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
PCDHGC3-204ENST00000617222 CENPWQ5EE01 88 aa11.29□□□□□ -0.6
PCDHGC3-204ENST00000617222 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
PCDHGC3-204ENST00000617222 NEU1Q99519 415 aa11.29□□□□□ -0.6
PCDHGC3-204ENST00000617222 PARLQ9H300 379 aa11.29□□□□□ -0.6
PCDHGC3-204ENST00000617222 SMDT1Q9H4I9 107 aa11.29□□□□□ -0.6
PCDHGC3-204ENST00000617222 U3KQK5 164 aa11.29□□□□□ -0.6
PCDHGC3-204ENST00000617222 NBEAL2Q6ZNJ1 2754 aa11.28□□□□□ -0.6
PCDHGC3-204ENST00000617222 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
PCDHGC3-204ENST00000617222 GNG4P50150 75 aa11.28□□□□□ -0.6
PCDHGC3-204ENST00000617222 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
PCDHGC3-204ENST00000617222 COX8CQ7Z4L0 72 aa11.28□□□□□ -0.6
PCDHGC3-204ENST00000617222 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
PCDHGC3-204ENST00000617222 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
PCDHGC3-204ENST00000617222 IGHV4-28A0A0C4DH34 117 aa11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 DEFB4AO15263 64 aa11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 PFN1P07737 140 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 MIFP14174 115 aa11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 AZU1P20160 251 aa11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 CRIP1P50238 77 aa11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 MUC21Q5SSG8 566 aa11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 NAGKQ9UJ70 344 aa11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 HUWE1Q7Z6Z7 4374 aaKnown RBP11.27□□□□□ -0.61
PCDHGC3-204ENST00000617222 TRBV20OR9-2A0A075B6H5 130 aa11.26□□□□□ -0.61
PCDHGC3-204ENST00000617222 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
PCDHGC3-204ENST00000617222 PGPEP1LA6NFU8 196 aa11.26□□□□□ -0.61
PCDHGC3-204ENST00000617222 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
PCDHGC3-204ENST00000617222 IGLV2-8P01709 118 aa11.26□□□□□ -0.61
PCDHGC3-204ENST00000617222 MGST1P10620 155 aaKnown RBP11.26□□□□□ -0.61
PCDHGC3-204ENST00000617222 Q8NAQ8 132 aa11.26□□□□□ -0.61
PCDHGC3-204ENST00000617222 ZNF727A8MUV8 499 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 C9JCJ5 164 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 SH2D1AO60880 128 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 FAM162BQ5T6X4 162 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 PRR27Q6MZM9 219 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 FAM159AQ6UWV7 190 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
PCDHGC3-204ENST00000617222 A0A0J9YWU9 116 aa11.24□□□□□ -0.61
PCDHGC3-204ENST00000617222 LINC00862A6NCI5 91 aa11.24□□□□□ -0.61
PCDHGC3-204ENST00000617222 CBY3A6NI87 242 aa11.24□□□□□ -0.61
PCDHGC3-204ENST00000617222 EMP1P54849 157 aa11.24□□□□□ -0.61
PCDHGC3-204ENST00000617222 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
PCDHGC3-204ENST00000617222 SMIM12Q96EX1 92 aa11.24□□□□□ -0.61
PCDHGC3-204ENST00000617222 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
PCDHGC3-204ENST00000617222 GNRH2O43555 120 aa11.23□□□□□ -0.61
PCDHGC3-204ENST00000617222 ORM1P02763 201 aa11.23□□□□□ -0.61
PCDHGC3-204ENST00000617222 OR5I1Q13606 314 aa11.23□□□□□ -0.61
PCDHGC3-204ENST00000617222 SOHLH1Q5JUK2 328 aa11.23□□□□□ -0.61
PCDHGC3-204ENST00000617222 TDRG1Q3Y452 100 aa11.22□□□□□ -0.61
PCDHGC3-204ENST00000617222 FAM74A3Q4VXF1 159 aa11.22□□□□□ -0.61
PCDHGC3-204ENST00000617222 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
PCDHGC3-204ENST00000617222 RNASE8Q8TDE3 154 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-204ENST00000617222 TMEM263Q8WUH6 116 aaKnown RBP11.22□□□□□ -0.61
PCDHGC3-204ENST00000617222 C16orf74Q96GX8 76 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms