RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 LINC00587B1AMM8 73 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 LGALS1P09382 135 aaKnown RBP5.89□□□□□ -1.47
NEK3-207ENST00000617054 CT45A10P0DMU9 189 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 ATRQ13535 2644 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 KLHL30-AS1Q8NEE0 82 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 UBE2E2Q96LR5 201 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 NRN1Q9NPD7 142 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 CLEC5AQ9NY25 188 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 A4D1N5 150 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 INAFM1C9JVW0 142 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 ORM1P02763 201 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 ELANEP08246 267 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 JMJD8Q96S16 334 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 ZNF580Q9UK33 172 aa5.89□□□□□ -1.47
NEK3-207ENST00000617054 A8MWL6 223 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 ARMS2P0C7Q2 107 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 ZNF688P0C7X2 276 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 CD28P10747 220 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 ZNF575Q86XF7 245 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 SLC50A1Q9BRV3 221 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 A0A1W2PS18 150 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 S100A7P31151 101 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 CDX1P47902 265 aaPredicted RBP5.88□□□□□ -1.47
NEK3-207ENST00000617054 HIST1H1AQ02539 215 aaPredicted RBP5.88□□□□□ -1.47
NEK3-207ENST00000617054 PRR9Q5T870 116 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 ADAMTSL5Q6ZMM2 481 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 HIST3H2BBQ8N257 126 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 Q8N2B8 174 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 OR10D4PQ8NGN7 298 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 ATP6V0BQ99437 205 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
NEK3-207ENST00000617054 NPIPB6E9PJ23 425 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 SOCS3O14543 225 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 FAM162BQ5T6X4 162 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 TMEM78Q5T7P6 136 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 DLX4Q92988 240 aaPredicted RBP5.87□□□□□ -1.47
NEK3-207ENST00000617054 MS4A6AQ9H2W1 248 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 NIT2Q9NQR4 276 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 ZNF492Q9P255 531 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 TP53TG3Q9ULZ0 132 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 TMEM189A5PLL7 270 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 ZNF253O75346 499 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 SRIP30626 198 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 IQCJQ1A5X6 159 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 LINC01006Q8NI28 216 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 MYOZ3Q8TDC0 251 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 SMIM12Q96EX1 92 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 GNB1LQ9BYB4 327 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 ZNF124Q15973 351 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 SAPCD1Q5SSQ6 148 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 LYZL1Q6UWQ5 148 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 DCANP1Q8TF63 244 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 CITED2Q99967 270 aaPredicted RBP5.87□□□□□ -1.47
NEK3-207ENST00000617054 GSN-AS1Q9NRJ2 163 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 NAGKQ9UJ70 344 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 TIMM8BQ9Y5J9 83 aaPredicted RBP5.87□□□□□ -1.47
NEK3-207ENST00000617054 BAHCC1Q9P281 2608 aa5.87□□□□□ -1.47
NEK3-207ENST00000617054 C2orf70A6NJV1 201 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 M0QZ24 198 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 APCSP02743 223 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 CRISP2P16562 243 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 S100A2P29034 98 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 PSMG4Q5JS54 123 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 RBPMS2Q6ZRY4 209 aaKnown RBP5.86□□□□□ -1.47
NEK3-207ENST00000617054 DPF1Q92782 380 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 RCHY1Q96PM5 261 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 MSRB1Q9NZV6 116 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 UFC1Q9Y3C8 167 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 ZNF138P52744 262 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 OR1N2Q8NGR9 330 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 HIST1H2BLQ99880 126 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 TRBV6-1A0A0K0K1D8 114 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 LINC00310P59036 64 aa5.86□□□□□ -1.47
NEK3-207ENST00000617054 KLF5Q13887 457 aaPredicted RBP5.86□□□□□ -1.47
NEK3-207ENST00000617054 IGKV3D-20A0A0C4DH25 116 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 TMEM89A2RUT3 159 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 LINC01619G3V211 115 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 K7EMT4 169 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 SERF1AO75920 110 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 CTAG1AP78358 180 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 BAGE3Q86Y29 109 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 NDFIP1Q9BT67 221 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 TRAV9-1A0A075B6T8 112 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 SERTM2A0A1B0GWG4 89 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 A0A1B0GXF2 115 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 AMBPP02760 352 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 RNASE4P34096 147 aaKnown RBP5.85□□□□□ -1.47
NEK3-207ENST00000617054 HBBP68871 147 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 PYY3Q5JQD4 70 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 TMEM86BQ8N661 226 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 OR4B1Q8NGF8 309 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 RAX2Q96IS3 184 aa5.85□□□□□ -1.47
NEK3-207ENST00000617054 TRAV12-2A0A075B6T6 113 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 PTTG1IPP53801 180 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 C9orf47Q6ZRZ4 202 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 OR8A1Q8NGG7 326 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 OR10J6PQ8NGY7 276 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 ZNF418Q8TF45 676 aaPredicted RBP5.84□□□□□ -1.47
NEK3-207ENST00000617054 PACRGQ96M98 296 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms