RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 C14orf166Q9Y224 244 aaKnown RBP4.26□□□□□ -1.73
MUC1-227ENST00000615517 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
MUC1-227ENST00000615517 FBLL1A6NHQ2 334 aaKnown RBP4.25□□□□□ -1.73
MUC1-227ENST00000615517 ANKRD65E5RJM6 399 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 H3BP45 60 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 ZNF561-AS1K7EIQ3 104 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 M0R2P5 195 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 GNRH2O43555 120 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 NDUFB4O95168 129 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
MUC1-227ENST00000615517 RPS19P39019 145 aaKnown RBP4.25□□□□□ -1.73
MUC1-227ENST00000615517 SELENOTP62341 195 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 RPL19P84098 196 aaKnown RBP4.25□□□□□ -1.73
MUC1-227ENST00000615517 RHOHQ15669 191 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 FAAP20Q6NZ36 180 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 C7orf33Q8WU49 177 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 RNF185Q96GF1 192 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 ZNF492Q9P255 531 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 Q9UF83 564 aa4.25□□□□□ -1.73
MUC1-227ENST00000615517 MUC21A0A0G2JKD1 596 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 H7C1H1 209 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 K7EPK0 472 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 WRBO00258 174 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 POLR2GP62487 172 aaKnown RBP eCLIP4.24□□□□□ -1.73
MUC1-227ENST00000615517 SLC38A11Q08AI6 406 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 BAK1Q16611 211 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 GUK1Q16774 197 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 SPANXN5Q5MJ07 72 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 CFAP126Q5VTH2 177 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 ENHOQ6UWT2 76 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 S100A7AQ86SG5 101 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 ZNF546Q86UE3 836 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 OR51S1Q8NGJ8 323 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 OR52I2Q8NH67 350 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 Q8TAT8 98 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 RAB2BQ8WUD1 216 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 GTSF1Q8WW33 167 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 OR51M1Q9H341 326 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 RNF24Q9Y225 148 aa4.24□□□□□ -1.73
MUC1-227ENST00000615517 TRGV11A0A075B6L2 103 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 GAGE12JA6NER3 117 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 SYNGR2O43760 224 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 RAB3DO95716 219 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 SLPIP03973 132 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 TBPP20226 339 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 GAGE1Q13065 139 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 GAGE4Q13068 117 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 GAGE5Q13069 117 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 ZNF266Q14584 549 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 SURF2Q15527 256 aaPredicted RBP4.23□□□□□ -1.73
MUC1-227ENST00000615517 PRR4Q16378 134 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 GAGE13Q4V321 117 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 TMEM78Q5T7P6 136 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 PXDC1Q5TGL8 231 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 Q6AWC8 147 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 EXOC3-AS1Q8N2X6 119 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 CYB561D1Q8N8Q1 229 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 TMEM229BQ8NBD8 167 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 YIPF6Q96EC8 236 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 CDIP1Q9H305 208 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 MTFP1Q9UDX5 166 aa4.23□□□□□ -1.73
MUC1-227ENST00000615517 SMIM31A0A1B0GVY4 71 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 C5orf51A6NDU8 294 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 COX7A2P2O60397 106 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 MED6O75586 246 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 HLA-DQA1P01909 254 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 APOA1P02647 267 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 INPP1P49441 399 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 RRAS2P62070 204 aaPredicted RBP4.22□□□□□ -1.73
MUC1-227ENST00000615517 CNBPP62633 177 aaKnown RBP4.22□□□□□ -1.73
MUC1-227ENST00000615517 RPP30P78346 268 aaKnown RBP4.22□□□□□ -1.73
MUC1-227ENST00000615517 Q0VG73 95 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 C10orf113Q5VZT2 155 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 KRTAP26-1Q6PEX3 210 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 CROCCP3Q8IVE0 287 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 OR10G9Q8NGN4 311 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 NRG4Q8WWG1 115 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 CIB3Q96Q77 187 aaPredicted RBP4.22□□□□□ -1.73
MUC1-227ENST00000615517 SAMD10Q9BYL1 202 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 VCXQ9H320 206 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 COMMD3Q9UBI1 195 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 KCNIP3Q9Y2W7 256 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 STRAPQ9Y3F4 350 aaKnown RBP4.22□□□□□ -1.73
MUC1-227ENST00000615517 URGCP-MRPS24S4R325 110 aa4.22□□□□□ -1.73
MUC1-227ENST00000615517 IGHV3-64A0A075B6Q5 118 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 A0A087WWC5 75 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 TRBV7-9A0A0J9YWB2 115 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 GOSR2O14653 212 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 TAAR5O14804 337 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 AGPAT2O15120 278 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 HPGDSO60760 199 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 TYMSP04818 313 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 SEC11BP0C7V7 166 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 ZNF138P52744 262 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 TAS2R19P59542 299 aa4.21□□□□□ -1.74
MUC1-227ENST00000615517 GABARAPL2P60520 117 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms