RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 IGHV3OR16-13A0A075B7E8 117 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 IGHV3-49A0A0A0MS15 119 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 IGHV3-74A0A0B4J1X5 117 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 HTN1P15515 57 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 MSMPQ1L6U9 139 aa6.88□□□□□ -1.31
PDE6A-204ENST00000613228 IGKV2-40A0A087WW87 121 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-204ENST00000613228 IGKV2D-40P01614 121 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-204ENST00000613228 FOXE3Q13461 319 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 PIP4P2Q8N4L2 257 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 GLMPQ8WWB7 406 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 FXYD5Q96DB9 178 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 OVOL2Q9BRP0 275 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 BRWD1Q9NSI6 2320 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 SDK2Q58EX2 2172 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 F5H768 121 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 HAX1O00165 279 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 PLA2G5P39877 138 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 ZNF747Q9BV97 191 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 LINC01619G3V211 115 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 CRXO43186 299 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-204ENST00000613228 HIST1H4AP62805 103 aaKnown RBP6.87□□□□□ -1.31
PDE6A-204ENST00000613228 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-204ENST00000613228 C20orf78Q9BR46 151 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 TPSG1Q9NRR2 321 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 CEP290O15078 2479 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 CENPVL3A0A0U1RRI6 287 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 DIAPH2-AS1Q14236 149 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 DEFB113Q30KQ7 82 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 RHPN1-AS1Q9BWJ2 59 aa6.87□□□□□ -1.31
PDE6A-204ENST00000613228 PRSS46E5RG02 174 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 RNF223E7ERA6 249 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 UQCRQO14949 82 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 MLANAQ16655 118 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 ZC2HC1AQ96GY0 325 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 LINC01587Q99440 93 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 ODF3BA8MYP8 253 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 I3L2K1 104 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 SIRPDQ9H106 197 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 M0R381 172 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 NPC2P61916 151 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 Q96MF0 132 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 TRBV6-1A0A0K0K1D8 114 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 SYNJ2BPP57105 145 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 RNF114Q9Y508 228 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 TRAV12-3A0A0B4J271 114 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 LTAP01374 205 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 LENEPQ9Y5L5 61 aa6.86□□□□□ -1.31
PDE6A-204ENST00000613228 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 K7EN84 100 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 CD7P09564 240 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 CYYR1Q96J86 154 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 LINC00479Q96M42 142 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 SRSF2Q01130 221 aaKnown RBP6.85□□□□□ -1.31
PDE6A-204ENST00000613228 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 VPREB3Q9UKI3 123 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 FAM120AOSQ5T036 256 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 LYZL1Q6UWQ5 148 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 C3orf22Q8N5N4 141 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 RNF182Q8N6D2 247 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 DPH3P1Q9H4G8 78 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 KNTC1P50748 2209 aa6.85□□□□□ -1.31
PDE6A-204ENST00000613228 C19orf54Q5BKX5 351 aa6.84□□□□□ -1.31
PDE6A-204ENST00000613228 ZNF491Q8N8L2 437 aa6.84□□□□□ -1.31
PDE6A-204ENST00000613228 FXYD2P54710 66 aa6.84□□□□□ -1.31
PDE6A-204ENST00000613228 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
PDE6A-204ENST00000613228 CSDC2Q9Y534 153 aaKnown RBP6.84□□□□□ -1.31
PDE6A-204ENST00000613228 IGHV3OR16-8A0A075B7F1 116 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 WI2-2373I1.2A0A1W2PRP0 233 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 RBMY1BA6NDE4 496 aaKnown RBP6.84□□□□□ -1.32
PDE6A-204ENST00000613228 RBMY1EA6NEQ0 496 aaKnown RBP6.84□□□□□ -1.32
PDE6A-204ENST00000613228 KNCNA6PVL3 124 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 RBMY1DP0C7P1 496 aaKnown RBP6.84□□□□□ -1.32
PDE6A-204ENST00000613228 RBMY1A1P0DJD3 496 aaKnown RBP6.84□□□□□ -1.32
PDE6A-204ENST00000613228 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 SRD5A1P18405 259 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 RBMY1FQ15415 496 aaKnown RBP6.84□□□□□ -1.32
PDE6A-204ENST00000613228 C11orf71Q6IPW1 123 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 UFSP1Q6NVU6 142 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 TMEM86BQ8N661 226 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 Q8N7P7 452 aa6.84□□□□□ -1.32
PDE6A-204ENST00000613228 MPDZO75970 2070 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 WISP2O76076 250 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 INSP01308 110 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 Q6ZPA2 131 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 PCP2Q8IVA1 136 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 ZDBF2Q9HCK1 2354 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 ARID1AO14497 2285 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 TEX22C9J3V5 150 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 NDUFA7O95182 113 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 FAM74A4Q5TZK3 123 aa6.83□□□□□ -1.32
PDE6A-204ENST00000613228 IGHV7-81A0A0B4J1V7 117 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms