RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 VGLL1Q99990 258 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 AVPP01185 164 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
CDH1-213ENST00000612417 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 Q96MF0 132 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 CR1P17927 2039 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 A0A096LNJ9 63 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 BUB3O43684 328 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 GPR183P32249 361 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 IFI27P40305 119 aaPredicted RBP11.33□□□□□ -0.6
CDH1-213ENST00000612417 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
CDH1-213ENST00000612417 SLC25A34Q6PIV7 304 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 ZNF575Q86XF7 245 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 Q8TAT8 98 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 PRELID3AQ96N28 172 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 SIGLEC8Q9NYZ4 499 aa11.33□□□□□ -0.6
CDH1-213ENST00000612417 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 RHOGP84095 191 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 MRPL51Q4U2R6 128 aaKnown RBP11.32□□□□□ -0.6
CDH1-213ENST00000612417 WFDC12Q8WWY7 111 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 MEGF9Q9H1U4 602 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 SCGB1A1P11684 91 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 HLA-DMBP28068 263 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 SCGB2A2Q13296 93 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 ECSCRQ19T08 205 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 SLC50A1Q9BRV3 221 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 CST9LQ9H4G1 147 aa11.32□□□□□ -0.6
CDH1-213ENST00000612417 CCDC140Q96MF4 163 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 PRRC2AP48634 2157 aaKnown RBP11.31□□□□□ -0.6
CDH1-213ENST00000612417 CLPSL1A2RUU4 121 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 J3QLI3 93 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 CLEC3BP05452 202 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 LY6EQ16553 131 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 IGFL4Q6B9Z1 124 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
CDH1-213ENST00000612417 CREBBPQ92793 2442 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 FABP5P3A8MUU1 101 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 IGHV4-31P0DP07 118 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 PIFOQ8TCI5 191 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 DPF1Q92782 380 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 NPFFR1Q9GZQ6 430 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 MOB4Q9Y3A3 225 aa11.3□□□□□ -0.6
CDH1-213ENST00000612417 GCN1Q92616 2671 aaKnown RBP11.3□□□□□ -0.6
CDH1-213ENST00000612417 IGHV3OR16-8A0A075B7F1 116 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 TRBV7-1A0A0A6YYK4 115 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 H3BUX3 64 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 C5orf56Q8N8D9 126 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
CDH1-213ENST00000612417 TP73-AS1Q9UF72 201 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 A0A1B0GV72 72 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 TWIST1Q15672 202 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
CDH1-213ENST00000612417 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 TEX15Q9BXT5 2789 aa11.29□□□□□ -0.6
CDH1-213ENST00000612417 H0Y8G0 127 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 NCR2O95944 276 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 CCDC168Q8NDH2 2452 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 LINC01546A6NGU7 62 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 HBDP02042 147 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 COX8AP10176 69 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 CKS2P33552 79 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 PMCHL2Q9BQD1 86 aa11.28□□□□□ -0.6
CDH1-213ENST00000612417 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
CDH1-213ENST00000612417 LINC01548A6NM66 108 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 G3V318 75 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 NPYP01303 97 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 ORM1P02763 201 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
CDH1-213ENST00000612417 BVES-AS1Q5T3Y7 98 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 U3KQE9 123 aa11.27□□□□□ -0.61
CDH1-213ENST00000612417 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 ERCC8Q13216 396 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 KRTAP1-3Q8IUG1 177 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 METTL26Q96S19 204 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 NUDT3O95989 172 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
CDH1-213ENST00000612417 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
CDH1-213ENST00000612417 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms