RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 EXOC3-AS1Q8N2X6 119 aa6.65□□□□□ -1.35
SMAD4-217ENST00000611848 ARL6IP6Q8N6S5 226 aa6.65□□□□□ -1.35
SMAD4-217ENST00000611848 CMTM2Q8TAZ6 248 aa6.65□□□□□ -1.35
SMAD4-217ENST00000611848 MRAPQ8TCY5 172 aa6.65□□□□□ -1.35
SMAD4-217ENST00000611848 TSKUQ8WUA8 353 aa6.65□□□□□ -1.35
SMAD4-217ENST00000611848 C17orf77Q96MU5 243 aa6.65□□□□□ -1.35
SMAD4-217ENST00000611848 TP53TG3Q9ULZ0 132 aa6.65□□□□□ -1.35
SMAD4-217ENST00000611848 PRKDCP78527 4128 aaKnown RBP6.64□□□□□ -1.35
SMAD4-217ENST00000611848 NPIPB6E9PJ23 425 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 K7EIL1 84 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 HLA-DQA1P01909 254 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 CRISP2P16562 243 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 EDN2P20800 178 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 BMI1P35226 326 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 CD300EQ496F6 205 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-217ENST00000611848 PRR27Q6MZM9 219 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 CDPF1Q6NVV7 123 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 C16orf54Q6UWD8 224 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 LINC00322Q6ZN03 302 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-217ENST00000611848 TMEM256Q8N2U0 113 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 TMEM75Q8N9X5 138 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 NUP35Q8NFH5 326 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 SGK494Q96LW2 274 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 PRR25Q96S07 402 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 RPP21Q9H633 154 aaKnown RBP6.64□□□□□ -1.35
SMAD4-217ENST00000611848 NAT8BQ9UHF3 227 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 RPH3ALQ9UNE2 315 aa6.64□□□□□ -1.35
SMAD4-217ENST00000611848 IGHV3OR16-8A0A075B7F1 116 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 TRAV25A0A0B4J276 109 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 IGHV7-4-1A0A0J9YVY3 117 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 FAM231BA6NCW3 169 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 NUPR1O60356 82 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 SPINK4O60575 86 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 GZMBP10144 247 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 LINC00310P59036 64 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 MRPL54Q6P161 138 aaKnown RBP6.63□□□□□ -1.35
SMAD4-217ENST00000611848 GOLT1AQ6ZVE7 132 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 ATP5L2Q7Z4Y8 100 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 NEU1Q99519 415 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 GFRA4Q9GZZ7 299 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 ZNF331Q9NQX6 463 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-217ENST00000611848 SMPXQ9UHP9 88 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 ZFP30Q9Y2G7 519 aa6.63□□□□□ -1.35
SMAD4-217ENST00000611848 TRAV8-1A0A0A6YYK1 113 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 SERTM2A0A1B0GWG4 89 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 A0A1B0GXF2 115 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 A0A1W2PS18 150 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 GRIFINA4D1Z8 144 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 ZNF785A8K8V0 405 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 A8MWL6 223 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 LINC00587B1AMM8 73 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 DIRC3C9JPN6 131 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 K7EQM0 130 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 ZNF207O43670 478 aaKnown RBP6.62□□□□□ -1.35
SMAD4-217ENST00000611848 P01737 135 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 RPL7P18124 248 aaKnown RBP6.62□□□□□ -1.35
SMAD4-217ENST00000611848 S100A7P31151 101 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 OR10J3Q5JRS4 329 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 RBPMS2Q6ZRY4 209 aaKnown RBP6.62□□□□□ -1.35
SMAD4-217ENST00000611848 OR4B1Q8NGF8 309 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 METTL26Q96S19 204 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 RHPN1-AS1Q9BWJ2 59 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 RABAC1Q9UI14 185 aa6.62□□□□□ -1.35
SMAD4-217ENST00000611848 HIGD1CA8MV81 97 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 CHEK1O14757 476 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 ZNF253O75346 499 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 APCSP02743 223 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 PAFAH1B2P68402 229 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 PSG9Q00887 426 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 PSG3Q16557 428 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 DEFB121Q5J5C9 76 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 GDF5OSQ5U4N7 250 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 PRNTQ86SH4 94 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 TMEM61Q8N0U2 210 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 GTSF1Q8WW33 167 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 PSG8Q9UQ74 426 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 SMAD5-AS1Q9Y6J3 95 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 SERF1AO75920 110 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 FOXA3P55318 350 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-217ENST00000611848 CTAG1AP78358 180 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 COX8CQ7Z4L0 72 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 GTSCR1Q86UQ5 136 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 DAZAP1Q96EP5 407 aaKnown RBP6.61□□□□□ -1.35
SMAD4-217ENST00000611848 AAMDCQ9H7C9 122 aa6.61□□□□□ -1.35
SMAD4-217ENST00000611848 A0A087X0K7 114 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 IGHV3-49A0A0A0MS15 119 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 FBLL1A6NHQ2 334 aaKnown RBP6.6□□□□□ -1.35
SMAD4-217ENST00000611848 M0R3E3 92 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 RAB4BP61018 213 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 SLAQ13239 276 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 BAGE3Q86Y29 109 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 Q8N1Y9 231 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 ZC2HC1AQ96GY0 325 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 SPAG8Q99932 426 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-217ENST00000611848 U3KQE9 123 aa6.6□□□□□ -1.35
SMAD4-217ENST00000611848 IGHV3OR16-13A0A075B7E8 117 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 IGHV3-74A0A0B4J1X5 117 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 F2Z2F3 143 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 BUB3O43684 328 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 APOHP02749 345 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms