RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	CCL8	P80075	99 aa		13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150	LINC00311	Q8N616	119 aa		13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150	KNTC1	P50748	2209 aa		13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150	FAM186A	A6NE01	2351 aa		13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150	IGHV3-13	P01766	116 aa		13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150	CD69	Q07108	199 aa		13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150	MRPL14	Q6P1L8	145 aa	Known RBP	13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150	S1PR3	Q99500	378 aa		13.35	□□□□□ -0.27
CDK11B-205	ENST00000611150		A0A0J9YY99	117 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	RPS21	P63220	83 aa	Known RBP	13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150		Q1RN00	199 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	C2orf83	Q53S99	150 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	PTPRZ1	P23471	2315 aa	Predicted RBP	13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	FRYL	O94915	3013 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	CFAP54	Q96N23	3096 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150		H7C423	109 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	PLAU	P00749	431 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	COX6B1	P14854	86 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150		Q6ZT83	130 aa		13.34	□□□□□ -0.27
CDK11B-205	ENST00000611150	IGLV2-11	P01706	119 aa		13.33	□□□□□ -0.28
CDK11B-205	ENST00000611150	CCL11	P51671	97 aa		13.33	□□□□□ -0.28
CDK11B-205	ENST00000611150	MLANA	Q16655	118 aa		13.33	□□□□□ -0.28
CDK11B-205	ENST00000611150		H7C2G1	150 aa		13.32	□□□□□ -0.28
CDK11B-205	ENST00000611150	SERP2	Q8N6R1	65 aa		13.32	□□□□□ -0.28
CDK11B-205	ENST00000611150	SCNM1	Q9BWG6	230 aa		13.32	□□□□□ -0.28
CDK11B-205	ENST00000611150	CEP192	Q8TEP8	1941 aa		13.32	□□□□□ -0.28
CDK11B-205	ENST00000611150	PSMB8	P28062	276 aa		13.32	□□□□□ -0.28
CDK11B-205	ENST00000611150		Q8IYB0	196 aa		13.32	□□□□□ -0.28
CDK11B-205	ENST00000611150	C17orf100	A8MU93	164 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	LAGE3	Q14657	143 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	NEXN-AS1	Q8NBZ9	246 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	UPK3B	Q9BT76	320 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	TP53TG1	Q9Y2A0	90 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150		A0A0B4J2C4	111 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150		A0A0U1RRA0	63 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	ELANE	P08246	267 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	NPC2	P61916	151 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	EP300	Q09472	2414 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	MED12	Q93074	2177 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150	ZNF292	O60281	2723 aa		13.31	□□□□□ -0.28
CDK11B-205	ENST00000611150		J3QT63	122 aa		13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	IL17REL	Q6ZVW7	336 aa		13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	TMEM263	Q8WUH6	116 aa	Known RBP	13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	OTOGL	Q3ZCN5	2332 aa		13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	DEFB108A	A8MXU0	73 aa		13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	SSR4	P51571	173 aa		13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	SLC25A29	Q8N8R3	303 aa		13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	GVINP1	Q7Z2Y8	2422 aa		13.3	□□□□□ -0.28
CDK11B-205	ENST00000611150	IGHV3-15	A0A0B4J1V0	119 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	IGHV3-43	A0A0B4J1X8	118 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	TRBV30	A0A0K0K1B3	111 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	NDUFC2-KCTD14	E9PQ53	114 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	IGHV3-43D	P0DP04	118 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	HOXB4	P17483	251 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	PRCD	Q00LT1	54 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	RPL18A	Q02543	176 aa	Known RBP	13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	PEMT	Q9UBM1	199 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	TMEM178B	H3BS89	294 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	PRR7	Q8TB68	274 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	SMCR5	Q8TEV8	140 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	PATE1	Q8WXA2	126 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150	DEC1	Q9P2X7	70 aa		13.29	□□□□□ -0.28
CDK11B-205	ENST00000611150		A0A1W2PQU0	124 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	MRPS21	P82921	87 aa	Known RBP	13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	GPR179	Q6PRD1	2367 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150		A0A1W2PP55	124 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	SPINT2	O43291	252 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	PROP1	O75360	226 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	SPINK2	P20155	84 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	TNFRSF4	P43489	277 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	TMEM75	Q8N9X5	138 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	FOXB1	Q99853	325 aa		13.28	□□□□□ -0.28
CDK11B-205	ENST00000611150	IGLV3-32	A0A0A0MS00	114 aa		13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150	KLHL30-AS1	Q8NEE0	82 aa		13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150	RNF185	Q96GF1	192 aa		13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150	PRR25	Q96S07	402 aa		13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150	BEX4	Q9NWD9	120 aa	Predicted RBP	13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150	TRAV12-2	A0A075B6T6	113 aa		13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150	CRIP1	P50238	77 aa		13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150	LOXL3	P58215	753 aa		13.27	□□□□□ -0.29
CDK11B-205	ENST00000611150		A0A0U1RQV1	116 aa		13.26	□□□□□ -0.29
CDK11B-205	ENST00000611150	GP9	P14770	177 aa		13.26	□□□□□ -0.29
CDK11B-205	ENST00000611150	LPAL2	Q16609	132 aa		13.26	□□□□□ -0.29
CDK11B-205	ENST00000611150	NSUN5P1	Q3KNT7	163 aa		13.26	□□□□□ -0.29
CDK11B-205	ENST00000611150	IGLV2-18	A0A075B6J9	118 aa		13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150		H3BTX0	84 aa		13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	RNASE2	P10153	161 aa	Known RBP	13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	SDIM1	Q6ZPB5	146 aa		13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	IL17D	Q8TAD2	202 aa		13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	WFDC11	Q8NEX6	87 aa		13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	FSCN3	Q9NQT6	498 aa		13.25	□□□□□ -0.29
CDK11B-205	ENST00000611150	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK11B-205	ENST00000611150	SSUH2	Q9Y2M2	353 aa		13.24	□□□□□ -0.29
CDK11B-205	ENST00000611150	INTS1	Q8N201	2190 aa	Known RBP	13.24	□□□□□ -0.29
CDK11B-205	ENST00000611150	NDUFC2	O95298	119 aa		13.24	□□□□□ -0.29
CDK11B-205	ENST00000611150	COX6C	P09669	75 aa		13.24	□□□□□ -0.29
CDK11B-205	ENST00000611150	LINC01561	Q8N1V8	128 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms