RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RPL11P62913 178 aaKnown RBP15.81■□□□□ 0.12
SSBP3-216ENST00000610401 SAMD5Q5TGI4 173 aa15.81■□□□□ 0.12
SSBP3-216ENST00000610401 RAB1BQ9H0U4 201 aa15.8■□□□□ 0.12
SSBP3-216ENST00000610401 FABP5P3A8MUU1 101 aa15.8■□□□□ 0.12
SSBP3-216ENST00000610401 BMI1P35226 326 aa15.8■□□□□ 0.12
SSBP3-216ENST00000610401 CEACAM3P40198 252 aa15.8■□□□□ 0.12
SSBP3-216ENST00000610401 CSTL1Q9H114 145 aa15.8■□□□□ 0.12
SSBP3-216ENST00000610401 MRPL35Q9NZE8 188 aaKnown RBP15.8■□□□□ 0.12
SSBP3-216ENST00000610401 H3BRM9 83 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 M0R381 172 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 JKAMPQ9P055 326 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 FABP2P12104 132 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 SPANXN1Q5VSR9 72 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 A0A1B0GW15 77 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 PPBPP02775 128 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 ZNF562Q6V9R5 426 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 ZNF575Q86XF7 245 aa15.79■□□□□ 0.12
SSBP3-216ENST00000610401 A0A1W2PPM0 123 aa15.78■□□□□ 0.12
SSBP3-216ENST00000610401 H3BVH4 76 aa15.78■□□□□ 0.12
SSBP3-216ENST00000610401 ZFP36P26651 326 aaKnown RBP15.78■□□□□ 0.12
SSBP3-216ENST00000610401 CHAC1Q9BUX1 264 aa15.78■□□□□ 0.12
SSBP3-216ENST00000610401 K7EP34 96 aa15.78■□□□□ 0.12
SSBP3-216ENST00000610401 SMIM13P0DJ93 91 aa15.77■□□□□ 0.12
SSBP3-216ENST00000610401 ODF1Q14990 250 aa15.77■□□□□ 0.12
SSBP3-216ENST00000610401 TIMD4Q96H15 378 aa15.77■□□□□ 0.12
SSBP3-216ENST00000610401 IGKV3D-20A0A0C4DH25 116 aa15.77■□□□□ 0.12
SSBP3-216ENST00000610401 SMIM17P0DL12 118 aa15.77■□□□□ 0.12
SSBP3-216ENST00000610401 EMP1P54849 157 aa15.77■□□□□ 0.12
SSBP3-216ENST00000610401 MAPKAPK5-AS1Q8N8E1 139 aa15.77■□□□□ 0.12
SSBP3-216ENST00000610401 IGKCP01834 107 aa15.77■□□□□ 0.11
SSBP3-216ENST00000610401 AGPAT4-IT1Q9H0P7 198 aa15.77■□□□□ 0.11
SSBP3-216ENST00000610401 NEGR1Q7Z3B1 354 aa15.76■□□□□ 0.11
SSBP3-216ENST00000610401 USP9YO00507 2555 aaPredicted RBP15.76■□□□□ 0.11
SSBP3-216ENST00000610401 TRBV25-1A0A075B6N4 114 aa15.76■□□□□ 0.11
SSBP3-216ENST00000610401 IGHV7-81A0A0B4J1V7 117 aa15.76■□□□□ 0.11
SSBP3-216ENST00000610401 ATP6V0E1O15342 81 aa15.76■□□□□ 0.11
SSBP3-216ENST00000610401 PDE6HQ13956 83 aa15.76■□□□□ 0.11
SSBP3-216ENST00000610401 TEX48A0A1B0GUV7 120 aa15.75■□□□□ 0.11
SSBP3-216ENST00000610401 U3KQK5 164 aa15.75■□□□□ 0.11
SSBP3-216ENST00000610401 UFSP1Q6NVU6 142 aa15.75■□□□□ 0.11
SSBP3-216ENST00000610401 S100A7AQ86SG5 101 aa15.75■□□□□ 0.11
SSBP3-216ENST00000610401 GTSF1LQ9H1H1 148 aa15.75■□□□□ 0.11
SSBP3-216ENST00000610401 IGLC6P0CF74 106 aa15.75■□□□□ 0.11
SSBP3-216ENST00000610401 SRD5A1P18405 259 aa15.75■□□□□ 0.11
SSBP3-216ENST00000610401 OR9G4Q8NGQ1 327 aa15.74■□□□□ 0.11
SSBP3-216ENST00000610401 HHLA3Q9XRX5 114 aa15.74■□□□□ 0.11
SSBP3-216ENST00000610401 SH2D6Q7Z4S9 175 aa15.74■□□□□ 0.11
SSBP3-216ENST00000610401 POLQO75417 2590 aa15.74■□□□□ 0.11
SSBP3-216ENST00000610401 COL25A1Q9BXS0 654 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-216ENST00000610401 H3BMG7 143 aa15.73■□□□□ 0.11
SSBP3-216ENST00000610401 PAX8Q06710 450 aa15.73■□□□□ 0.11
SSBP3-216ENST00000610401 OR4X2Q8NGF9 303 aa15.73■□□□□ 0.11
SSBP3-216ENST00000610401 MGPP08493 103 aa15.72■□□□□ 0.11
SSBP3-216ENST00000610401 TMEM78Q5T7P6 136 aa15.72■□□□□ 0.11
SSBP3-216ENST00000610401 HIST1H4GQ99525 98 aa15.72■□□□□ 0.11
SSBP3-216ENST00000610401 PAX2Q02962 417 aa15.72■□□□□ 0.11
SSBP3-216ENST00000610401 TRBV6-1A0A0K0K1D8 114 aa15.71■□□□□ 0.11
SSBP3-216ENST00000610401 WFDC2Q14508 124 aa15.71■□□□□ 0.11
SSBP3-216ENST00000610401 MYOZ3Q8TDC0 251 aa15.71■□□□□ 0.11
SSBP3-216ENST00000610401 UTP20O75691 2785 aaKnown RBP15.71■□□□□ 0.11
SSBP3-216ENST00000610401 F6UB75 175 aa15.71■□□□□ 0.11
SSBP3-216ENST00000610401 IGHV3-11P01762 117 aa15.71■□□□□ 0.11
SSBP3-216ENST00000610401 ARL6IP6Q8N6S5 226 aa15.71■□□□□ 0.11
SSBP3-216ENST00000610401 NPFFR1Q9GZQ6 430 aa15.71■□□□□ 0.11
SSBP3-216ENST00000610401 PRTN3P24158 256 aa15.71■□□□□ 0.1
SSBP3-216ENST00000610401 NPBQ8NG41 125 aa15.71■□□□□ 0.1
SSBP3-216ENST00000610401 UBTD1Q9HAC8 227 aa15.71■□□□□ 0.1
SSBP3-216ENST00000610401 DPM2O94777 84 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 TGFAP01135 160 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 SMAGPQ0VAQ4 97 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 OR11H6Q8NGC7 330 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 C16orf92Q96LL3 132 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 S100A4P26447 101 aaKnown RBP15.7■□□□□ 0.1
SSBP3-216ENST00000610401 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 TTC9CQ8N5M4 171 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 RNF5Q99942 180 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 CYSLTR1Q9Y271 337 aa15.7■□□□□ 0.1
SSBP3-216ENST00000610401 BUB3O43684 328 aa15.69■□□□□ 0.1
SSBP3-216ENST00000610401 C14orf178Q8N769 122 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-216ENST00000610401 RPL39LQ96EH5 51 aaKnown RBP15.69■□□□□ 0.1
SSBP3-216ENST00000610401 SCGB2A2Q13296 93 aa15.69■□□□□ 0.1
SSBP3-216ENST00000610401 ETDBQ3ZM63 59 aa15.69■□□□□ 0.1
SSBP3-216ENST00000610401 Q8N9W7 124 aa15.69■□□□□ 0.1
SSBP3-216ENST00000610401 SETD2Q9BYW2 2564 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-216ENST00000610401 G3V4G9 280 aa15.68■□□□□ 0.1
SSBP3-216ENST00000610401 PRR9Q5T870 116 aa15.68■□□□□ 0.1
SSBP3-216ENST00000610401 MSRB2Q9Y3D2 182 aa15.68■□□□□ 0.1
SSBP3-216ENST00000610401 RPS20P60866 119 aaKnown RBP15.68■□□□□ 0.1
SSBP3-216ENST00000610401 GATD1Q8NB37 220 aa15.68■□□□□ 0.1
SSBP3-216ENST00000610401 NXT2Q9NPJ8 142 aaKnown RBP15.67■□□□□ 0.1
SSBP3-216ENST00000610401 TMEM238C9JI98 176 aa15.67■□□□□ 0.1
SSBP3-216ENST00000610401 C8orf86Q6ZUL3 223 aa15.67■□□□□ 0.1
SSBP3-216ENST00000610401 LY6G5BQ8NDX9 201 aa15.67■□□□□ 0.1
SSBP3-216ENST00000610401 VKORC1Q9BQB6 163 aa15.67■□□□□ 0.1
SSBP3-216ENST00000610401 SAA4P35542 130 aa15.67■□□□□ 0.1
SSBP3-216ENST00000610401 TCF15Q12870 199 aa15.67■□□□□ 0.1
SSBP3-216ENST00000610401 BRD3OSQ6XYD6 125 aa15.67■□□□□ 0.1
SSBP3-216ENST00000610401 TRBV12-3P01733 135 aa15.66■□□□□ 0.1
SSBP3-216ENST00000610401 CCDC140Q96MF4 163 aa15.66■□□□□ 0.1
SSBP3-216ENST00000610401 ZANQ9Y493 2812 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms