RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 A0A0B4J2C4 111 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 H3BQ15 152 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 SLC25A20O43772 301 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 HYPMO75409 117 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 LY6HO94772 140 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 IGLV1-51P01701 117 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 CLPSP04118 112 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 SLC25A4P12235 298 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 CD24P25063 80 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 RPL26P61254 145 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 MRPS36P82909 103 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 AKR1C1Q04828 323 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 ZNF846Q147U1 533 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 CDK5R1Q15078 307 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 SS18Q15532 418 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 KHDC3LQ587J8 217 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 EIF5AL1Q6IS14 154 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 NOXRED1Q6NXP6 359 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 ZNF322Q6U7Q0 402 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 UNQ5815/PRO19632Q6UWF5 114 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 Q6ZQT7 251 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 SBSPONQ8IVN8 264 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 OR5AS1Q8N127 324 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 FAM216BQ8N7L0 139 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 C10orf82Q8WW14 230 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 PSMF1Q92530 271 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 GABARAPL1Q9H0R8 117 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 ATG5Q9H1Y0 275 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 SMDT1Q9H4I9 107 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 BET1LQ9NYM9 111 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 HHLA3Q9XRX5 114 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 CASZ1Q86V15 1759 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 KIDINS220Q9ULH0 1771 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 MARF1Q9Y4F3 1742 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 ZC3H13Q5T200 1668 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 UACAQ9BZF9 1416 aa1.99□□□□□ -2.09
SMCHD1-213ENST00000609587 CHD3Q12873 2000 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 IGKV1D-37A0A075B6S9 117 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 RBAKDNA6NC62 111 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 C17orf98A8MV24 154 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 K7EP34 96 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 EDF1O60869 148 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 TCL1BO95988 128 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 TRACP01848 142 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 NMBP08949 121 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 SAA1P0DJI8 122 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 BLCAPP62952 87 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 SUPT4H1P63272 117 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 IQCJQ1A5X6 159 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 MIC13Q5XKP0 118 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 ATP11AUNQ6ZP68 121 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 POP5Q969H6 163 aaKnown RBP1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 RAB37Q96AX2 223 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 DSCR8Q96T75 97 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 NABP2Q9BQ15 211 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 GINS4Q9BRT9 223 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 DPH3P1Q9H4G8 78 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 ANK1P16157 1881 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 CCDC180Q9P1Z9 1646 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 SCN9AQ15858 1988 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 TANC2Q9HCD6 1990 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 PPLO60437 1756 aa1.98□□□□□ -2.09
SMCHD1-213ENST00000609587 COL24A1Q17RW2 1714 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 PRDM15P57071 1507 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 DISP1Q96F81 1524 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 NYNRINQ9P2P1 1898 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 TET3O43151 1660 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 NCOA2Q15596 1464 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 MDFIC2A0A1B0GVS7 189 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 IGLC7A0M8Q6 106 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 GRIFINA4D1Z8 144 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 SSSCA1O60232 199 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 YPEL1O60688 119 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 COX6A1P12074 109 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 TPT1P13693 172 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 FABP4P15090 132 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 COX7CP15954 63 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 SLC25A16P16260 332 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 NPC2P61916 151 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 ZNF705AQ6ZN79 300 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 ZNF720Q7Z2F6 126 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 Q8IYB0 196 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 Q8N8P6 123 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 MYOZ3Q8TDC0 251 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 U3KQK5 164 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 C10orf71Q711Q0 1435 aa1.97□□□□□ -2.09
SMCHD1-213ENST00000609587 SCN8AQ9UQD0 1980 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 PLEKHH2Q8IVE3 1493 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 SHROOM2Q13796 1616 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 TRAV14DV4A0A0A6YYC5 116 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 IGHV3-73A0A0B4J1V6 119 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 TRBV7-7A0A0K0K1E9 115 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 A6NED7 52 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 IBA57-AS1B1ANH7 110 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 B4DSR2 109 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 SDCBPO00560 298 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 PROSCO94903 275 aa1.96□□□□□ -2.1
SMCHD1-213ENST00000609587 SHBGP04278 402 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms