RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 UBE2E2Q96LR5 201 aa8.71□□□□□ -1.01
LINC01278-204ENST00000609143 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.01
LINC01278-204ENST00000609143 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.01
LINC01278-204ENST00000609143 TP53TG3Q9ULZ0 132 aa8.71□□□□□ -1.01
LINC01278-204ENST00000609143 A0A1B0GW15 77 aa8.71□□□□□ -1.02
LINC01278-204ENST00000609143 SERF1AO75920 110 aa8.71□□□□□ -1.02
LINC01278-204ENST00000609143 ESDP10768 282 aa8.71□□□□□ -1.02
LINC01278-204ENST00000609143 C9orf47Q6ZRZ4 202 aa8.71□□□□□ -1.02
LINC01278-204ENST00000609143 RNF152Q8N8N0 203 aa8.71□□□□□ -1.02
LINC01278-204ENST00000609143 C20orf202A1L168 122 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 SOCS3O14543 225 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
LINC01278-204ENST00000609143 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
LINC01278-204ENST00000609143 CCDC168Q8NDH2 2452 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 TMSB15BA0A087X1C1 80 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 CCL25O15444 150 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 NUPR1O60356 82 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 PPBPP02775 128 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 TFPI2P48307 235 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 BATFQ16520 125 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 TPPP3Q9BW30 176 aa8.7□□□□□ -1.02
LINC01278-204ENST00000609143 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 OVOL1O14753 267 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 CD5LO43866 347 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 ARMS2P0C7Q2 107 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 PTTG1IPP53801 180 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 PAFAH1B2P68402 229 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 COL5A1-AS1Q5SY13 56 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 SAMD13Q5VXD3 122 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 C20orf173Q96LM9 149 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 F2Z2F3 143 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 LINC00310P59036 64 aa8.69□□□□□ -1.02
LINC01278-204ENST00000609143 SCGB1D1O95968 90 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 ORM1P02763 201 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 OR10J6PQ8NGY7 276 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
LINC01278-204ENST00000609143 YAE1D1Q9NRH1 226 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 LENEPQ9Y5L5 61 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 HIST1H1AQ02539 215 aaPredicted RBP8.68□□□□□ -1.02
LINC01278-204ENST00000609143 C18orf32Q8TCD1 76 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 MIEN1Q9BRT3 115 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
LINC01278-204ENST00000609143 FLNAP21333 2647 aaKnown RBP8.68□□□□□ -1.02
LINC01278-204ENST00000609143 IGKV3-7A0A075B6H7 116 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 A0A087WW49 117 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 FAM181BA6NEQ2 426 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 DNAJC9-AS1A6NH13 148 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 CBY3A6NI87 242 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 LGALS9O00182 355 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 KRTAP1-1Q07627 177 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 KLF5Q13887 457 aaPredicted RBP8.67□□□□□ -1.02
LINC01278-204ENST00000609143 LYZL1Q6UWQ5 148 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 KLHDC1Q8N7A1 406 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 LINC00477Q96M19 166 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 NAGKQ9UJ70 344 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 TLN2Q9Y4G6 2542 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 ID1P41134 155 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 FER1L6-AS1Q8NA97 138 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 KCNS1Q96KK3 526 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 LOC102724200A0A096LPH7 203 aaPredicted RBP8.67□□□□□ -1.02
LINC01278-204ENST00000609143 C20orf144Q9BQM9 153 aa8.67□□□□□ -1.02
LINC01278-204ENST00000609143 PDZD2O15018 2839 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 EDN2P20800 178 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 HOXD3P31249 432 aaPredicted RBP8.66□□□□□ -1.02
LINC01278-204ENST00000609143 CTRLP40313 264 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 SYNJ2BPP57105 145 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 UNC79Q9P2D8 2635 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 ZNF705DP0CH99 300 aaPredicted RBP8.66□□□□□ -1.02
LINC01278-204ENST00000609143 ZNF705BP0CI00 300 aaPredicted RBP8.66□□□□□ -1.02
LINC01278-204ENST00000609143 SCGB2A2Q13296 93 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 ORAOV1Q8WV07 137 aa8.66□□□□□ -1.02
LINC01278-204ENST00000609143 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
LINC01278-204ENST00000609143 PRR31Q5SQ13 230 aa8.65□□□□□ -1.02
LINC01278-204ENST00000609143 SRD5A1P18405 259 aa8.65□□□□□ -1.03
LINC01278-204ENST00000609143 Q6ZSV7 163 aa8.65□□□□□ -1.03
LINC01278-204ENST00000609143 OR8A1Q8NGG7 326 aa8.65□□□□□ -1.03
LINC01278-204ENST00000609143 SELENOKQ9Y6D0 94 aa8.65□□□□□ -1.03
LINC01278-204ENST00000609143 M0QZ24 198 aa8.64□□□□□ -1.03
LINC01278-204ENST00000609143 AMTP48728 403 aa8.64□□□□□ -1.03
LINC01278-204ENST00000609143 ZNF493Q6ZR52 646 aa8.64□□□□□ -1.03
LINC01278-204ENST00000609143 DCANP1Q8TF63 244 aa8.64□□□□□ -1.03
LINC01278-204ENST00000609143 ZNF324O75467 553 aaPredicted RBP8.64□□□□□ -1.03
LINC01278-204ENST00000609143 GPX1P07203 203 aa8.64□□□□□ -1.03
LINC01278-204ENST00000609143 VPS25Q9BRG1 176 aa8.64□□□□□ -1.03
LINC01278-204ENST00000609143 CSTL1Q9H114 145 aa8.64□□□□□ -1.03
LINC01278-204ENST00000609143 TRBV7-9A0A0J9YWB2 115 aa8.63□□□□□ -1.03
LINC01278-204ENST00000609143 PMCHP20382 165 aa8.63□□□□□ -1.03
LINC01278-204ENST00000609143 KHDC1LQ5JSQ8 128 aa8.63□□□□□ -1.03
LINC01278-204ENST00000609143 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
LINC01278-204ENST00000609143 C4orf3Q8WVX3 66 aa8.63□□□□□ -1.03
LINC01278-204ENST00000609143 MS4A6AQ9H2W1 248 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms