RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 G3V318 75 aa10.48□□□□□ -0.73
USP6NL-205ENST00000609104 RHODO00212 210 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 CRLF1O75462 422 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 UTF1Q5T230 341 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 ADAMTS9Q9P2N4 1935 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 MRPL35Q9NZE8 188 aaKnown RBP10.47□□□□□ -0.73
USP6NL-205ENST00000609104 PLXNB1O43157 2135 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 MBD3L4A6NDZ8 208 aaPredicted RBP10.47□□□□□ -0.73
USP6NL-205ENST00000609104 MBD3L3A6NE82 208 aaPredicted RBP10.47□□□□□ -0.73
USP6NL-205ENST00000609104 MBD3L5A6NJ08 208 aaPredicted RBP10.47□□□□□ -0.73
USP6NL-205ENST00000609104 MBD3L2Q8NHZ7 208 aaPredicted RBP10.47□□□□□ -0.73
USP6NL-205ENST00000609104 V9GYV3 84 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 TRAV13-2A0A0B4J235 113 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 LGALS9BQ3B8N2 356 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 LGALS9CQ6DKI2 356 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 IGHV1OR15-1A0A075B7D0 117 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 KLF5Q13887 457 aaPredicted RBP10.47□□□□□ -0.73
USP6NL-205ENST00000609104 GVINP1Q7Z2Y8 2422 aa10.47□□□□□ -0.73
USP6NL-205ENST00000609104 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.73
USP6NL-205ENST00000609104 IGLC2P0DOY2 106 aa10.46□□□□□ -0.73
USP6NL-205ENST00000609104 IGLC3P0DOY3 106 aa10.46□□□□□ -0.73
USP6NL-205ENST00000609104 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.73
USP6NL-205ENST00000609104 K7EP34 96 aa10.46□□□□□ -0.73
USP6NL-205ENST00000609104 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
USP6NL-205ENST00000609104 IGKV1-6A0A0C4DH72 117 aa10.46□□□□□ -0.73
USP6NL-205ENST00000609104 CARD19Q96LW7 228 aa10.46□□□□□ -0.74
USP6NL-205ENST00000609104 OR11H6Q8NGC7 330 aa10.46□□□□□ -0.74
USP6NL-205ENST00000609104 ANGP03950 147 aaKnown RBP10.45□□□□□ -0.74
USP6NL-205ENST00000609104 CGB7P0DN87 165 aa10.45□□□□□ -0.74
USP6NL-205ENST00000609104 NCOA6Q14686 2063 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-205ENST00000609104 IGF2BP2-AS1Q96M15 143 aa10.45□□□□□ -0.74
USP6NL-205ENST00000609104 CDKN1BP46527 198 aa10.45□□□□□ -0.74
USP6NL-205ENST00000609104 MSMBP08118 114 aa10.45□□□□□ -0.74
USP6NL-205ENST00000609104 ZNF833PQ6ZTB9 187 aa10.45□□□□□ -0.74
USP6NL-205ENST00000609104 RBM3P98179 157 aaKnown RBP10.45□□□□□ -0.74
USP6NL-205ENST00000609104 ZNF726P1Q15940 193 aa10.45□□□□□ -0.74
USP6NL-205ENST00000609104 ZC2HC1AQ96GY0 325 aa10.45□□□□□ -0.74
USP6NL-205ENST00000609104 FAM110DQ8TAY7 271 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-205ENST00000609104 F8VRH5 84 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 YPEL3P61236 119 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-205ENST00000609104 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 PRR25Q96S07 402 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 UBE2E1P51965 193 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 DKK2Q9UBU2 259 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 PRSS29PA6NIE9 313 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 GATA4P43694 442 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 ZNF106Q9H2Y7 1883 aaKnown RBP10.44□□□□□ -0.74
USP6NL-205ENST00000609104 IGKV1-39P01597 117 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 IGKV1D-39P04432 117 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 CRYBA4P53673 196 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 CFHR4Q92496 578 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 IGHV2-70P01814 119 aa10.44□□□□□ -0.74
USP6NL-205ENST00000609104 SHISA9B4DS77 424 aa10.43□□□□□ -0.74
USP6NL-205ENST00000609104 C17orf58Q2M2W7 97 aa10.43□□□□□ -0.74
USP6NL-205ENST00000609104 CACNA1GO43497 2377 aa10.43□□□□□ -0.74
USP6NL-205ENST00000609104 HCFC1P51610 2035 aa10.43□□□□□ -0.74
USP6NL-205ENST00000609104 C15orf53Q8NAA6 179 aa10.43□□□□□ -0.74
USP6NL-205ENST00000609104 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
USP6NL-205ENST00000609104 DUX4L9Q6RFH8 374 aaPredicted RBP10.43□□□□□ -0.74
USP6NL-205ENST00000609104 ZNF134P52741 427 aa10.43□□□□□ -0.74
USP6NL-205ENST00000609104 NOTCH4Q99466 2003 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 AMTNQ6UX39 209 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 IGHV1-69DA0A0B4J2H0 117 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 IGHV1-69P01742 117 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 APOC4P55056 127 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 C5orf47Q569G3 176 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 NDUFS7O75251 213 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 LHBP01229 141 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 VOPP1Q96AW1 172 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 TPSG1Q9NRR2 321 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 H3BRN7 92 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 NPYP01303 97 aa10.42□□□□□ -0.74
USP6NL-205ENST00000609104 NBL1P41271 181 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 HERVK_113P63121 156 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 Q96MF0 132 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 COL4A6Q14031 1691 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 C12orf74Q32Q52 190 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 J3QQQ9 107 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 C17orf82Q86X59 251 aaPredicted RBP10.41□□□□□ -0.74
USP6NL-205ENST00000609104 XCL1P47992 114 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 CRYGCP07315 174 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 PCDH15Q96QU1 1955 aa10.41□□□□□ -0.74
USP6NL-205ENST00000609104 FOXL2NBQ6ZUU3 175 aa10.4□□□□□ -0.74
USP6NL-205ENST00000609104 NDUFA4O00483 81 aa10.4□□□□□ -0.74
USP6NL-205ENST00000609104 EGR2P11161 476 aaPredicted RBP10.4□□□□□ -0.74
USP6NL-205ENST00000609104 KIAA1671Q9BY89 1806 aa10.4□□□□□ -0.74
USP6NL-205ENST00000609104 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.4□□□□□ -0.74
USP6NL-205ENST00000609104 LMO1P25800 156 aa10.4□□□□□ -0.74
USP6NL-205ENST00000609104 FXYD5Q96DB9 178 aa10.4□□□□□ -0.74
USP6NL-205ENST00000609104 FREM1Q5H8C1 2179 aa10.4□□□□□ -0.75
USP6NL-205ENST00000609104 BAALC-AS2P0C853 105 aa10.39□□□□□ -0.75
USP6NL-205ENST00000609104 GATA3P23771 443 aa10.39□□□□□ -0.75
USP6NL-205ENST00000609104 SP5Q6BEB4 398 aaPredicted RBP10.39□□□□□ -0.75
USP6NL-205ENST00000609104 SMIM2Q9BVW6 85 aa10.39□□□□□ -0.75
USP6NL-205ENST00000609104 Q71RC1 249 aaPredicted RBP10.39□□□□□ -0.75
USP6NL-205ENST00000609104 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms