RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 FAM74A4Q5TZK3 123 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 APRG1Q8IVJ8 170 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 LYPD1Q8N2G4 141 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 TMEM191AQ9H0A3 160 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 TRAV12-3A0A0B4J271 114 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 SERF1AO75920 110 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 IGLV1-40P01703 118 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 SPINK13Q1W4C9 94 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 PRIMA1Q86XR5 153 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 TMEM256Q8N2U0 113 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 FLNCQ14315 2725 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 NUDT3O95989 172 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 IGLV2-14P01704 120 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 TRBV12-3P01733 135 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 PPIFP30405 207 aaKnown RBP3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 SLAQ13239 276 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 KLF5Q13887 457 aaPredicted RBP3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 ZNF56Q15929 161 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 HIST2H2BDQ6DRA6 164 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 OR4C5Q8NGB2 326 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 OR8A1Q8NGG7 326 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 MDFIQ99750 246 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 EPDR1Q9UM22 224 aa3.96□□□□□ -1.78
SCARNA15-201ENST00000607520 IZUMO1RA6ND01 250 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 PROP1O75360 226 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 CDKN1BP46527 198 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 KRTAP1-1Q07627 177 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 PMCHL1Q16048 86 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 Q8N2B8 174 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 CITED1Q99966 193 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 MAP1LC3CQ9BXW4 147 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 GNB1LQ9BYB4 327 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 LY96Q9Y6Y9 160 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 INS-IGF2F8WCM5 200 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 J3QL48 77 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 PSCAO43653 123 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 OR5AL1P0C617 328 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 HBBP68871 147 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 FNDC4Q9H6D8 234 aaPredicted RBP3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 FRYLO94915 3013 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 GNG5P63218 68 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 ZNF493Q6ZR52 646 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 THAP8Q8NA92 274 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 C11orf45Q8TAV5 145 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 HSPB8Q9UJY1 196 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 U3KQK5 164 aa3.95□□□□□ -1.78
SCARNA15-201ENST00000607520 HIGD1CA8MV81 97 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 CRYGBP07316 175 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 ZNF25P17030 456 aaPredicted RBP3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 FCER1GP30273 86 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 VAMP3Q15836 100 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 VWC2Q2TAL6 325 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 SPATA45Q537H7 98 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 C18orf65Q6ZTR6 163 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 G3V4G9 280 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 M0R381 172 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 CCL18P55774 89 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 IGFL4Q6B9Z1 124 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 C16orf54Q6UWD8 224 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 FMC1Q96HJ9 113 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 VGLL1Q99990 258 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 NDUFAF3Q9BU61 184 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 RPP21Q9H633 154 aaKnown RBP3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 PSG8Q9UQ74 426 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 ZFP30Q9Y2G7 519 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 TNFRSF18Q9Y5U5 241 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 A0A1B0GV90 55 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 IGKV1-17P01599 117 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 UNQ9165/PRO28630Q6UXU0 137 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 FAM19A2Q8N3H0 131 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 C5orf30Q96GV9 206 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 UQCR10Q9UDW1 63 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 A0A087WX48 190 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 H3BRN7 92 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 TYMSP04818 313 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 COL5A1-AS1Q5SY13 56 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 CCDC140Q96MF4 163 aa3.94□□□□□ -1.78
SCARNA15-201ENST00000607520 TRAV8-6A0A0B4J262 113 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 NDUFS6O75380 124 aaKnown RBP3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 ATP5G1P05496 136 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 CRIP2P52943 208 aaPredicted RBP3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 NUDT10Q8NFP7 164 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 NUDT11Q96G61 164 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 IGKV2-40A0A087WW87 121 aaPredicted RBP3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 LOC389332A0A1B0GUA5 103 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 A0A1B0GUT8 65 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 GAGE12BA1L429 117 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 C7orf71A4D174 169 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 GAGE7O76087 117 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 IGKV2D-40P01614 121 aaPredicted RBP3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 GAGE12FP0CL80 117 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 GAGE12GP0CL81 117 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 GAGE12IP0CL82 117 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 GZMBP10144 247 aa3.93□□□□□ -1.78
SCARNA15-201ENST00000607520 ATOH7Q8N100 152 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms