RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ACOT6Q3I5F7 207 aaPredicted RBP10.21□□□□□ -0.77
SSBP4-214ENST00000607020 TCTE3Q8IZS6 198 aa10.21□□□□□ -0.77
SSBP4-214ENST00000607020 KCNRGQ8N5I3 272 aa10.21□□□□□ -0.77
SSBP4-214ENST00000607020 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.77
SSBP4-214ENST00000607020 ZNF331Q9NQX6 463 aaPredicted RBP10.21□□□□□ -0.77
SSBP4-214ENST00000607020 SLC17A3O00476 420 aa10.2□□□□□ -0.78
SSBP4-214ENST00000607020 PYYP10082 97 aa10.2□□□□□ -0.78
SSBP4-214ENST00000607020 GCSHP23434 173 aa10.2□□□□□ -0.78
SSBP4-214ENST00000607020 Q6ZSN1 163 aa10.2□□□□□ -0.78
SSBP4-214ENST00000607020 RPUSD4Q96CM3 377 aaKnown RBP10.2□□□□□ -0.78
SSBP4-214ENST00000607020 SAT2Q96F10 170 aaPredicted RBP10.2□□□□□ -0.78
SSBP4-214ENST00000607020 SH3BGRL3Q9H299 93 aa10.2□□□□□ -0.78
SSBP4-214ENST00000607020 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
SSBP4-214ENST00000607020 TRBV19A0A075B6N1 114 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 SNURFLB1AK76 121 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 ZNF253O75346 499 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 HIST1H1EP10412 219 aaKnown RBP10.19□□□□□ -0.78
SSBP4-214ENST00000607020 RAB2AP61019 212 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 SERF2P84101 59 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 PDE6HQ13956 83 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 OR51M1Q9H341 326 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 TMPRSS5Q9H3S3 457 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 CYTL1Q9NRR1 136 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 HMCN2Q8NDA2 5059 aa10.19□□□□□ -0.78
SSBP4-214ENST00000607020 A0A0D9SG52 128 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 K7EP13 123 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 OR7C2O60412 319 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 NXPH4O95158 308 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 DNAH10OSP0CZ25 163 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 TAS2R45P59539 299 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 KHDC3LQ587J8 217 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 AKAP14Q86UN6 197 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 OR10G4Q8NGN3 311 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 OR10G9Q8NGN4 311 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 OR10G7Q8NGN6 311 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 ARPC5LQ9BPX5 153 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 TMEM70Q9BUB7 260 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 PAXXQ9BUH6 204 aa10.18□□□□□ -0.78
SSBP4-214ENST00000607020 A0A1W2PPV4 95 aa10.17□□□□□ -0.78
SSBP4-214ENST00000607020 KRTAP29-1A8MX34 341 aaPredicted RBP10.17□□□□□ -0.78
SSBP4-214ENST00000607020 NDUFB4O95168 129 aa10.17□□□□□ -0.78
SSBP4-214ENST00000607020 MBP02144 154 aa10.17□□□□□ -0.78
SSBP4-214ENST00000607020 GFI1BQ5VTD9 330 aa10.17□□□□□ -0.78
SSBP4-214ENST00000607020 Q6ZTI0 123 aa10.17□□□□□ -0.78
SSBP4-214ENST00000607020 BLNKQ8WV28 456 aa10.17□□□□□ -0.78
SSBP4-214ENST00000607020 FXYD5Q96DB9 178 aa10.17□□□□□ -0.78
SSBP4-214ENST00000607020 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
SSBP4-214ENST00000607020 A0A1B0GVG6 124 aa10.16□□□□□ -0.78
SSBP4-214ENST00000607020 BCL2L11O43521 198 aa10.16□□□□□ -0.78
SSBP4-214ENST00000607020 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSBP4-214ENST00000607020 OR10J4P0C629 311 aa10.16□□□□□ -0.78
SSBP4-214ENST00000607020 NBEAP1P0C6P0 100 aa10.16□□□□□ -0.78
SSBP4-214ENST00000607020 UBE2L3P68036 154 aaKnown RBP10.16□□□□□ -0.78
SSBP4-214ENST00000607020 FAM122CQ6P4D5 195 aa10.16□□□□□ -0.78
SSBP4-214ENST00000607020 PYGO2Q9BRQ0 406 aa10.16□□□□□ -0.78
SSBP4-214ENST00000607020 KANTRA0A1W2PQU2 76 aa10.15□□□□□ -0.78
SSBP4-214ENST00000607020 ZNF324O75467 553 aaPredicted RBP10.15□□□□□ -0.78
SSBP4-214ENST00000607020 C1QBP02746 253 aa10.15□□□□□ -0.78
SSBP4-214ENST00000607020 CDC34P49427 236 aaPredicted RBP10.15□□□□□ -0.78
SSBP4-214ENST00000607020 ODF3Q96PU9 254 aa10.15□□□□□ -0.78
SSBP4-214ENST00000607020 ICOSQ9Y6W8 199 aa10.15□□□□□ -0.78
SSBP4-214ENST00000607020 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 PRAC2D3DTV9 90 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 PFDN1O60925 122 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 SERTAD4-AS1Q5TG53 156 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 LYPD5Q6UWN5 251 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 PQLC2Q6ZP29 291 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 TMUB2Q71RG4 321 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 RAB24Q969Q5 203 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
SSBP4-214ENST00000607020 PHYHIPLQ96FC7 376 aa10.14□□□□□ -0.79
SSBP4-214ENST00000607020 ZNF471Q9BX82 626 aaPredicted RBP10.14□□□□□ -0.79
SSBP4-214ENST00000607020 M0R3E3 92 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 HMGB3O15347 200 aaKnown RBP10.13□□□□□ -0.79
SSBP4-214ENST00000607020 PAX4O43316 350 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 STAG3L2P0CL84 134 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 STAG3L3P0CL85 134 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 PRB4P10163 310 aaPredicted RBP10.13□□□□□ -0.79
SSBP4-214ENST00000607020 EXOC3-AS1Q8N2X6 119 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 C11orf72Q8NBR9 251 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 LINC00467Q9BRT7 94 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 ACTR3CQ9C0K3 210 aaPredicted RBP10.13□□□□□ -0.79
SSBP4-214ENST00000607020 AAMDCQ9H7C9 122 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 MSRB1Q9NZV6 116 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 PRELID1Q9Y255 219 aa10.13□□□□□ -0.79
SSBP4-214ENST00000607020 ARL14EPLP0DKL9 152 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 LEPP41159 167 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 CD300CQ08708 224 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 SLAQ13239 276 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 LGALSLQ3ZCW2 172 aaPredicted RBP10.12□□□□□ -0.79
SSBP4-214ENST00000607020 AKR1C8PQ5T2L2 129 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 ZNF680Q8NEM1 530 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
SSBP4-214ENST00000607020 HYLS1Q96M11 299 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 LY96Q9Y6Y9 160 aa10.12□□□□□ -0.79
SSBP4-214ENST00000607020 TRAV12-3A0A0B4J271 114 aa10.11□□□□□ -0.79
SSBP4-214ENST00000607020 SEC11BP0C7V7 166 aa10.11□□□□□ -0.79
SSBP4-214ENST00000607020 CT45A10P0DMU9 189 aa10.11□□□□□ -0.79
SSBP4-214ENST00000607020 RANP62826 216 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms